RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KLHL31Q9H511 634 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 APMAPQ9HDC9 416 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 SLC12A4Q9UP95 1085 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 RAXQ9Y2V3 346 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 PCDHGA7Q9Y5G6 932 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 SLC22A7Q9Y694 548 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 ZFHX4Q86UP3 3567 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 ANKRD11Q6UB99 2663 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 APC2O95996 2303 aa18.86■□□□□ 0.61
PDLIM2-221ENST00000622702 HYKKA2RU49 373 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 GMNCA6NCL1 334 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SRRM3A6NNA2 597 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SHOX2O60902 331 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 RSL1D1O76021 490 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SMIM10L1P0DMW3 83 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SEC24CP53992 1094 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 IMPG1Q17R60 797 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 FAM214AQ32MH5 1076 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 DCAF12Q5T6F0 453 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 UTP15Q8TED0 518 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SMIM10Q96HG1 83 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 METTL2AQ96IZ6 378 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 C10orf90Q96M02 699 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 C3orf30Q96M34 536 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 CTRCQ99895 268 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 DDA1Q9BW61 102 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 TRIM55Q9BYV6 548 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 RIC8BQ9NVN3 520 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 FOXJ2Q9P0K8 574 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 PCDHB3Q9Y5E6 796 aa18.85■□□□□ 0.61
PDLIM2-221ENST00000622702 SH3BGRLO75368 114 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TROVE2P10155 538 aaKnown RBP eCLIP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ARSFP54793 590 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 PCBP4P57723 403 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TGM3Q08188 693 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TBL3Q12788 808 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 FAM53BQ14153 422 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 NDUFA9Q16795 377 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ST3GAL2Q16842 350 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 MUM1Q2TAK8 710 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 CGB2Q6NT52 195 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 PWWP2BQ6NUJ5 590 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ABHD17CQ6PCB6 329 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 CEACAM20Q6UY09 585 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ABHD13Q7L211 337 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 UBE3DQ7Z6J8 389 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 SNIP1Q8TAD8 396 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 RGMAQ96B86 450 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 MAELQ96JY0 434 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ZPBPQ9BS86 351 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 NDC1Q9BTX1 674 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ASPSCR1Q9BZE9 553 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 SRPK3Q9UPE1 567 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 PCDHGA3Q9Y5H0 932 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 B3GALT1Q9Y5Z6 326 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ACACAQ13085 2346 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 C4orf51C9J302 202 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 SDHDO14521 159 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 LSM1O15116 133 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ZNF749O43361 778 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ERI3O43414 337 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 VPS4BO75351 444 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TIAF1O95411 115 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 ALOX12P18054 663 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TSFMP43897 325 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 HERC3Q15034 1050 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TRIM40Q6P9F5 258 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 EPGNQ6UW88 154 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 METTL4Q8N3J2 472 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 STON2Q8WXE9 905 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 KCNC2Q96PR1 638 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TEFMQ96QE5 360 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 TBCDQ9BTW9 1192 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 B3GNT4Q9C0J1 378 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 NPHS2Q9NP85 383 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 CUTCQ9NTM9 273 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 AHSPQ9NZD4 102 aa18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 MRPS2Q9Y399 296 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-221ENST00000622702 USP24Q9UPU5 2620 aa18.83■□□□□ 0.61
PDLIM2-221ENST00000622702 ATP6AP2A0A1C7CYW4 349 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 PLPP1O14494 284 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SCRG1O75711 98 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 ATP6AP2O75787 350 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 MED26O95402 600 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 PRR35P0CG20 571 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF888P0CJ79 500 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 DRD4P21917 467 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 RAP1GDS1P52306 607 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 AQP5P55064 265 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SNRPNP63162 240 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 NR6A1Q15406 480 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SPIN4Q56A73 249 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SPDYAQ5MJ70 313 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 VWA5B1Q5TIE3 1220 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 PRAMEF17Q5VTA0 474 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 NIPAL1Q6NVV3 410 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 TMEM126BQ8IUX1 230 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF248Q8NDW4 579 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 ZCCHC10Q8TBK6 192 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 CHTF18Q8WVB6 975 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms