RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 IMPAD1Q9NX62 359 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 PURGQ9UJV8 347 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 NUDT19A8MXV4 375 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SEC14L5O43304 696 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PEX10O60683 326 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 VPS4BO75351 444 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ERCC2P18074 760 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ITGB5P18084 799 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 OGNP20774 298 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 ACADLP28330 430 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PREPP48147 710 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 RPIAP49247 311 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 NUDT6P53370 316 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CRISP3P54108 245 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ATP12AP54707 1039 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SPATA19Q7Z5L4 167 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ZNF605Q86T29 641 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KRT78Q8N1N4 520 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CHST13Q8NET6 341 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 OR1M1Q8NGA1 313 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GGHQ92820 318 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ZBED6CLQ96FA7 236 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 P2RY11Q96G91 374 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 NARS2Q96I59 477 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 TEX37Q96LM6 180 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 RIT2Q99578 217 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 RTP3Q9BQQ7 232 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 DPH7Q9BTV6 452 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SLC28A3Q9HAS3 691 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 POLE3Q9NRF9 147 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GPR83Q9NYM4 423 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PDP1Q9P0J1 537 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 SEC14L4Q9UDX3 406 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ENTPD4Q9Y227 616 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GPR45Q9Y5Y3 372 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GREB1LQ9C091 1923 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 TRPM7Q96QT4 1865 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GLYATL1P3A0A0U1RQE8 302 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 C2CD4BA6NLJ0 364 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 A8MVJ9 347 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 A8MXK9 166 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ISM1B1AKI9 464 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CXCR6O00574 342 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 LYPLA2O95372 231 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 RLN2P04090 185 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SLC10A3P09131 477 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 NMBRP28336 390 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 EPHA2P29317 976 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TGM4P49221 684 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PGDP52209 483 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ST3GAL4Q11206 333 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 NOGQ13253 232 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TECRLQ5HYJ1 363 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 Q5PR19 223 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SPOUT1Q5T280 376 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 AADACL4Q5VUY2 407 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KANSL1Q7Z3B3 1105 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TRIM69Q86WT6 500 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PSTKQ8IV42 348 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 FAM181AQ8N9Y4 354 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GPR156Q8NFN8 814 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 OR10A6Q8NH74 314 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SFT2D1Q8WV19 159 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PGAP3Q96FM1 320 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 ZDHHC12Q96GR4 267 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TREX2Q9BQ50 279 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 MED18Q9BUE0 208 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 MSTO1Q9BUK6 570 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CDCP1Q9H5V8 836 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SLC52A3Q9NQ40 469 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KCMF1Q9P0J7 381 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 FBXL2Q9UKC9 423 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 IQCMA0A1B0GVH7 501 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 MEX3AA1L020 520 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 ELOVL7A1L3X0 281 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 FAM170BA6NMN3 283 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 M0QYV0 167 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 AOC2O75106 756 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 SCELO95171 688 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 SMIM6P0DI80 62 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ALDH9A1P49189 494 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ERVK-25P63136 954 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 MTMR1Q13613 665 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PTPRCAPQ14761 206 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CST9Q5W186 159 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KANK2Q63ZY3 851 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CPZQ66K79 652 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 MEX3BQ6ZN04 569 aaKnown RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 RAB44Q7Z6P3 723 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 DNAJC22Q8N4W6 341 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 C12orf45Q8N5I9 185 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 COQ8AQ8NI60 647 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 GPR152Q8TDT2 470 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CREB3L1Q96BA8 519 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms