RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 WNT3P56703 355 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 LSAMPQ13449 338 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 ANXA8L1Q5VT79 327 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 KHDRBS2Q5VWX1 349 aaKnown RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 KRT80Q6KB66 452 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 WDR34Q96EX3 536 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 CENPNQ96H22 339 aaPredicted RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 DPH7Q9BTV6 452 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 UGT2B28Q9BY64 529 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PELI2Q9HAT8 420 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 TPT1P8Q9HAU6 139 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 AGPAT4Q9NRZ5 378 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 EBF1Q9UH73 591 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MAN2B2Q9Y2E5 1009 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 KNL1Q8NG31 2342 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 A0A1W2PPV9 198 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 LCMT2O60294 686 aaKnown RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 SEC24DO94855 1032 aaPredicted RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 FKBP9O95302 570 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PGM3O95394 542 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 UMPSP11172 480 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 TRPC1P48995 793 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SRP54P61011 504 aaKnown RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 CCINQ13939 588 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SPIDRQ14159 915 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.5□□□□□ -0.89
VTA1-205ENST00000620996 LRIF1Q5T3J3 769 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 FKBP9P1Q75LS8 142 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 R3HCC1LQ7Z5L2 792 aaKnown RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 TMEM126BQ8IUX1 230 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 METTL4Q8N3J2 472 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 TSTD1Q8NFU3 115 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 DNAJB8Q8NHS0 232 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 EXOSC8Q96B26 276 aaKnown RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 TPD52L3Q96J77 140 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 BTBD9Q96Q07 612 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MVB12BQ9H7P6 319 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 C2orf42Q9NWW7 574 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 UTS2RQ9UKP6 389 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 FBXL21Q9UKT6 434 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PRELID1Q9Y255 219 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MAP4K5Q9Y4K4 846 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 GMEB1Q9Y692 573 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 TNRC18O15417 2968 aaPredicted RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 DENND4AQ7Z401 1863 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MYOCOSA0A1B0GUC4 107 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 C7orf72A4D263 438 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 FAM220BPB1ANY3 271 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PLPP1O14494 284 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 EI24O14681 340 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 NDUFS4O43181 175 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 KDM1AO60341 852 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SCELO95171 688 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 NUDT7P0C024 238 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 ACPPP15309 386 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PKLRP30613 574 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 HSPA13P48723 471 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 ABHD18Q0P651 414 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MTAPQ13126 283 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SLC9B2Q86UD5 537 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 OR8J2Q8NGG1 315 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 MAL2Q969L2 176 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SDCCAG3Q96C92 435 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 FCRL1Q96LA6 429 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 C9orf16Q9BUW7 83 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 RAB11FIP5Q9BXF6 653 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SRMSQ9H3Y6 488 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PCDHGB5Q9Y5G0 923 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 U3KQV3 271 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PPM1DO15297 605 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 CST1P01037 141 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 RAP2AP10114 183 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ZNF26P17031 533 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 IST1P53990 364 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 KIAA1024LP59773 190 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 CSNK1G2P78368 415 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 IL1RL1Q01638 556 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 PRDX1Q06830 199 aaKnown RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 ILF3Q12906 894 aaKnown RBP eCLIP9.49□□□□□ -0.89
VTA1-205ENST00000620996 GAB1Q13480 694 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 C1orf61Q13536 156 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 TDGQ13569 410 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ZIK1Q3SY52 487 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 SPDYE7PQ495Y7 208 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 FAAH2Q6GMR7 532 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ZNF852Q6ZMS4 543 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 PAGE2Q7Z2X7 111 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 STK32CQ86UX6 486 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 SATL1Q86VE3 508 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 AMIGO1Q86WK6 493 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 FBXL6Q8N531 539 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ANKFN1Q8N957 763 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 PATE1Q8WXA2 126 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 DUS3LQ96G46 650 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms