RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 NACC2Q96BF6 587 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 REPS1Q96D71 796 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 L3HYPDHQ96EM0 354 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 CRB3Q9BUF7 120 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 MS4A8Q9BY19 250 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 REXO4Q9GZR2 422 aaKnown RBP17.3■□□□□ 0.36
LITAF-220ENST00000620789 IQCGQ9H095 443 aaKnown RBP17.3■□□□□ 0.36
LITAF-220ENST00000620789 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
LITAF-220ENST00000620789 SEMA3GQ9NS98 782 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 KCNMB2Q9Y691 235 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 FAM208BQ5VWN6 2430 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 SCN3AQ9NY46 2000 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 RGS16O15492 202 aaPredicted RBP17.29■□□□□ 0.36
LITAF-220ENST00000620789 BMP10O95393 424 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 OTCP00480 354 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 IGHEP01854 428 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 PIK3CBP42338 1070 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 XCR1P46094 333 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 CLCQ05315 142 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 ATP1A4Q13733 1029 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 ZRSR2Q15696 482 aaKnown RBP17.29■□□□□ 0.36
LITAF-220ENST00000620789 RBBP7Q16576 425 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 GGTA1PQ4G0N0 100 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 BEND6Q5SZJ8 279 aaPredicted RBP17.29■□□□□ 0.36
LITAF-220ENST00000620789 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 LAPTM4BQ86VI4 370 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 SHISA5Q8N114 240 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 CCDC63Q8NA47 563 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 OR4F6Q8NGB9 312 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 OR5T3Q8NGG3 340 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 HUS1BQ8NHY5 278 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 WBP1Q96G27 269 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 FAR2Q96K12 515 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 SMC6Q96SB8 1091 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 ARHGAP9Q9BRR9 750 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 CLK4Q9HAZ1 481 aaKnown RBP17.29■□□□□ 0.36
LITAF-220ENST00000620789 PRM3Q9NNZ6 103 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 ACSS2Q9NR19 701 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 SENP1Q9P0U3 644 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 C3orf18Q9UK00 162 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 PLLPQ9Y342 182 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 PCSK5Q92824 1860 aa17.29■□□□□ 0.36
LITAF-220ENST00000620789 ARGFXA6NJG6 315 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 IDSB3KWA1 339 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 PPP6CO00743 305 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 CPA3P15088 417 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 TSPAN8P19075 237 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 PLA2G16P53816 162 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 OLR1P78380 273 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 BTN3A2P78410 334 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 DDX39BQ13838 428 aaKnown RBP17.28■□□□□ 0.36
LITAF-220ENST00000620789 TRIM40Q6P9F5 258 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 ABHD17CQ6PCB6 329 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 MILR1Q7Z6M3 343 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 CROCCP2Q86T23 111 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 APLFQ8IW19 511 aaPredicted RBP17.28■□□□□ 0.36
LITAF-220ENST00000620789 WDR20Q8TBZ3 569 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 TRPC4APQ8TEL6 797 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 CMTM7Q96FZ5 175 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 MAGEB10Q96LZ2 347 aaPredicted RBP17.28■□□□□ 0.36
LITAF-220ENST00000620789 OR1F2PQ96R84 312 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 F2RL3Q96RI0 385 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 MTERF1Q99551 399 aaKnown RBP17.28■□□□□ 0.36
LITAF-220ENST00000620789 DMRT3Q9NQL9 472 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 MID2Q9UJV3 735 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 HS3ST3B1Q9Y662 390 aa17.28■□□□□ 0.36
LITAF-220ENST00000620789 A0A088AWK7 358 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 A0A0G2JN53 185 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 A0A1B0GTL3 188 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 PEX12O00623 359 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 SOCS6O14544 535 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 ATXN7O15265 892 aaPredicted RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 CHST10O43529 356 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 DNAJB6O75190 326 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 SPAG7O75391 227 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 JRKO75564 520 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 TGFB1P01137 390 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 HEXBP07686 556 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 ZNF10P21506 573 aaPredicted RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 IL10P22301 178 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 EMP2P54851 167 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 POLE2P56282 527 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 PHEXP78562 749 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 TGM3Q08188 693 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 TMEM35AQ53FP2 167 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 KHDRBS2Q5VWX1 349 aaKnown RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 CPZQ66K79 652 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 LETMD1Q6P1Q0 360 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 CHSY3Q70JA7 882 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 RNF175Q8N4F7 328 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 TMEM102Q8N9M5 508 aaPredicted RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 LSM14AQ8ND56 463 aaKnown RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 SRFBP1Q8NEF9 429 aaKnown RBP17.27■□□□□ 0.36
LITAF-220ENST00000620789 ARMC2Q8NEN0 867 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 PEX11GQ96HA9 241 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 QRFPRQ96P65 431 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 KCNC2Q96PR1 638 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 ZNF382Q96SR6 550 aa17.27■□□□□ 0.36
LITAF-220ENST00000620789 OXSMQ9NWU1 459 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms