RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ADAM29Q9UKF5 820 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 WBP11Q9Y2W2 641 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 GPR45Q9Y5Y3 372 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SLC22A7Q9Y694 548 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 LAMA1P25391 3075 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 EP300Q09472 2414 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 MUC6Q6W4X9 2439 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 FITM1A5D6W6 292 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CCT8L1PA6NM43 557 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 H3BMH7 237 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 RTCAO00442 366 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 PLPP1O14494 284 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 SLC22A2O15244 555 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 P2RX6O15547 441 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ERI3O43414 337 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 RFPL3O75679 317 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 KLK1P06870 262 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CTSBP07858 339 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ANXA4P09525 319 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 G6PDP11413 515 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CSRP1P21291 193 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 GPX3P22352 226 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ATP5A1P25705 553 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 MAPK1P28482 360 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TSFMP43897 325 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 PLA2G16P53816 162 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CLDN8P56748 225 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 INSM1Q01101 510 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ACY1Q03154 408 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 KLF10Q13118 480 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 SQLEQ14534 574 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 KCNAB1Q14722 419 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 HKDC1Q2TB90 917 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 DEFB110Q30KQ9 67 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 FAM214AQ32MH5 1076 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 PDCD4Q53EL6 469 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CCNYL2Q5T2Q4 361 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 PHF19Q5T6S3 580 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 GARNL3Q5VVW2 1013 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 FAM91A1Q658Y4 838 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM214Q6NUQ4 689 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TLDC1Q6P9B6 456 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TRIM40Q6P9F5 258 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 RBM44Q6ZP01 1051 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TRPM8Q7Z2W7 1104 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 PAGE2Q7Z2X7 111 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 COMMD6Q7Z4G1 85 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CLNKQ7Z7G1 428 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 SLCO6A1Q86UG4 719 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 FAM9CQ8IZT9 166 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 MIER2Q8N344 545 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ARHGEF39Q8N4T4 335 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 DEFB124Q8NES8 71 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 NETO1Q8TDF5 533 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 N4BP2L2Q92802 583 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 GAL3ST3Q96A11 431 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 KCNC2Q96PR1 638 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 C1orf50Q9BV19 199 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 CCDC106Q9BWC9 280 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF717Q9BY31 904 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 BRINP2Q9C0B6 783 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ROGDIQ9GZN7 287 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 LHX9Q9NQ69 397 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 SDR39U1Q9NRG7 319 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 STARD5Q9NSY2 213 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM45AQ9NWC5 275 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 BAIAP2L1Q9UHR4 511 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 MCM8Q9UJA3 840 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 DLGAP4Q9Y2H0 992 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 POLR3HQ9Y535 204 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 COPG1Q9Y678 874 aaKnown RBP7.63□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM131Q92545 1883 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 MYO15AQ9UKN7 3530 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ASXL3Q9C0F0 2248 aa7.63□□□□□ -1.19
CPNE3-209ENST00000620393 ADAMTS9Q9P2N4 1935 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 A0A0A6YYD5 115 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 HYKKA2RU49 373 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 CAPN14A8MX76 684 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM150CB9EJG8 249 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 PSMD12O00232 456 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 EBAG9O00559 213 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 ANKRD28O15084 1053 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 PCDH7O60245 1069 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 EEDO75530 441 aaKnown RBP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 OR2B3O76000 313 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 DKK1O94907 266 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 SCELO95171 688 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 MT-CO3P00414 261 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF888P0CJ79 500 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 ALOX12P18054 663 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 SDC1P18827 310 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 HIST1H1TP22492 207 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 TACR1P25103 407 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 TPP2P29144 1249 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 TIA1P31483 386 aaKnown RBP eCLIP7.62□□□□□ -1.19
CPNE3-209ENST00000620393 CCKBRP32239 447 aa7.62□□□□□ -1.19
CPNE3-209ENST00000620393 CSTF2P33240 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms