RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC39A7Q92504 469 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TMCO6Q96DC7 493 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2B2Q9GZK3 357 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ZBTB20Q9HC78 741 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 LUZP4Q9P127 313 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 RIMKLBQ9ULI2 386 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DOCK4Q8N1I0 1966 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM172BPA6NC97 362 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TBC1D3BA6NDS4 549 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 CLDN24A6NM45 220 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 IQCF5A8MTL0 148 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 GFRA2O00451 464 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ANXA5P08758 320 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 HTR1AP08908 422 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 PRPS2P11908 318 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 COX7A2P14406 83 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 CPEP16870 476 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 RCVRNP35243 200 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MRPL19P49406 292 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 RPP38P78345 283 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 HYAL1Q12794 435 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 POM121L1PQ3SYA9 428 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FBXO43Q4G163 708 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ANKRD34AQ69YU3 496 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 PNCKQ6P2M8 343 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MFSD4AQ8N468 514 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF566Q969W8 418 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ABCG8Q9H221 673 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF576Q9H609 170 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 THUMPD1Q9NXG2 353 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ARL15Q9NXU5 204 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ERVW-1Q9UQF0 538 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MYOFQ9NZM1 2061 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TFECO14948 347 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SUV39H1O43463 412 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 STK16O75716 305 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 PRLP01236 227 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC35A2P78381 396 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 DDX39BQ13838 428 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 MAD2L1BPQ15013 274 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 RUNDC3AQ59EK9 446 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 STEAP3Q658P3 488 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 TANGO2Q6ICL3 276 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 MRM1Q6IN84 353 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 C22orf39Q6P5X5 142 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CERS6Q6ZMG9 384 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 DPY19L3Q6ZPD9 716 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 RSPRY1Q96DX4 576 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CLIP3Q96DZ5 547 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 KCNH6Q9H252 994 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CCDC177Q9NQR7 707 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 KIAA1671Q9BY89 1806 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIOBPQ9H2D6 2365 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 COL4A4P53420 1690 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 A0A096LPI6 279 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 WNT9AO14904 365 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CLDN9O95484 217 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 POP4O95707 220 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CYP17A1P05093 508 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 NAT1P18440 290 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 GADD45AP24522 165 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 POU1F1P28069 291 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 GDF5P43026 501 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ACVR1Q04771 509 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CACNG1Q06432 222 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CDC20Q12834 499 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 NPRL3Q12980 569 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 PCBP2Q15366 365 aaKnown RBP eCLIP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 SMN1Q16637 294 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 DPY19L1Q2PZI1 675 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CARD16Q5EG05 197 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 LRRC73Q5JTD7 316 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CPZQ66K79 652 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 PSAPL1Q6NUJ1 521 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 RBFAQ8N0V3 343 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ASCC1Q8N9N2 400 aaKnown RBP6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CD200R1Q8TD46 325 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 APOLD1Q96LR9 279 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 MYOCQ99972 504 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 MTG2Q9H4K7 406 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ASB8Q9H765 288 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 GDE1Q9NZC3 331 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ENOPH1Q9UHY7 261 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 UTS2RQ9UKP6 389 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 PCDHGB1Q9Y5G3 927 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 ANAPC1Q9H1A4 1944 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 NOTOA8MTQ0 251 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 TTC34A8MYJ7 566 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 FPGTO14772 594 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 C9P02748 559 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 PCMT1P22061 227 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CASP3P42574 277 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 CDC42P60953 191 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 BCL2A1Q16548 175 aa6.73□□□□□ -1.33
SRGAP3-213ENST00000618999 C18orf21Q32NC0 220 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms