RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 RARRES1P49788 294 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NUDT2P50583 147 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NUDT6P53370 316 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ATXN3P54252 364 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 GALCP54803 685 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 RAB5BP61020 215 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 RRAS2P62070 204 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 HTRA4P83105 476 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 E2F1Q01094 437 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SEMG2Q02383 582 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 PRKCZQ05513 592 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 PDIA2Q13087 525 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 GPR17Q13304 367 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 IL18R1Q13478 541 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TP53BP2Q13625 1128 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CEACAM7Q14002 265 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 DRAP1Q14919 205 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 QPRTQ15274 297 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZNHIT3Q15649 155 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 ALG11Q2TAA5 492 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TMEM35AQ53FP2 167 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CYBRD1Q53TN4 286 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 XKR4Q5GH76 650 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TTC38Q5R3I4 469 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 AVPI1Q5T686 147 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NBPF12Q5TAG4 269 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 FAM46CQ5VWP2 391 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 MLIPQ5VWP3 458 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TMEM236Q5W0B7 351 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TTC23Q5W5X9 447 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 REP15Q6BDI9 236 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 FRMPD2BQ6IN97 320 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 RAB12Q6IQ22 244 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ANKRD54Q6NXT1 300 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CDC73Q6P1J9 531 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TAF2Q6P1X5 1199 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 DARS2Q6PI48 645 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 KLHL24Q6TFL4 600 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 HACD2Q6Y1H2 254 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SLC36A4Q6YBV0 504 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SCARA5Q6ZMJ2 495 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 LRRC8DQ7L1W4 858 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 EIF3MQ7L2H7 374 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 C16orf59Q7L2K0 433 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 COPS6Q7L5N1 327 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NLRC3Q7RTR2 1065 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SLC16A13Q7RTY0 426 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 PAGE2Q7Z2X7 111 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TRMT11Q7Z4G4 463 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 MRPL52Q86TS9 123 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 SERINC5Q86VE9 423 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 LRRTM4Q86VH4 590 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZC3HC1Q86WB0 502 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 TMC8Q8IU68 726 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CCDC71Q8IV32 467 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 MCEMP1Q8IX19 187 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NRSN1Q8IZ57 195 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZDHHC14Q8IZN3 488 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CBR4Q8N4T8 237 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CERS5Q8N5B7 392 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 EFHBQ8N7U6 833 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SLC44A5Q8NCS7 719 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 LINC00116Q8NCU8 138 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 BVESQ8NE79 360 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 IL17REQ8NFR9 667 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NLGN2Q8NFZ4 835 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 OR8J2Q8NGG1 315 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 OR52N2Q8NGI0 321 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 OR2L8Q8NGY9 312 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 OR10J5Q8NHC4 309 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ETNPPLQ8TBG4 499 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 FAR1Q8WVX9 515 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 CPA5Q8WXQ8 436 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TNFRSF14Q92956 283 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TMEM143Q96AN5 459 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SLCO4A1Q96BD0 722 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 EAF2Q96CJ1 260 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 CENPNQ96H22 339 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 SGCZQ96LD1 299 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 Q96MT0 163 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ZNF385AQ96PM9 386 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 KCNA7Q96RP8 456 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 PAFAH2Q99487 392 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 RBM4BQ9BQ04 359 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 APOL2Q9BQE5 337 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 EBF4Q9BQW3 602 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 LXNQ9BS40 222 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 SYT11Q9BT88 431 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 RBM4Q9BWF3 364 aaKnown RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 STRA6Q9BX79 667 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 ADGRE3Q9BY15 652 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 TRIM54Q9BYV2 358 aa3.38□□□□□ -1.87
SMC5-204ENST00000618375 NKX6-2Q9C056 277 aaPredicted RBP3.38□□□□□ -1.87
SMC5-204ENST00000618375 DERL2Q9GZP9 239 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms