RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZNF554Q86TJ5 538 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 LRRTM4Q86VH4 590 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR14C36Q8NHC7 312 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 IPCEF1Q8WWN9 437 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GEMIN6Q8WXD5 167 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 MTERF3Q96E29 417 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 F2RL3Q96RI0 385 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CLMPQ9H6B4 373 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC27A6Q9Y2P4 619 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GSTK1Q9Y2Q3 226 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 MICAL3Q7RTP6 2002 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 A0A0J9YVX5 310 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 UGT2B17O75795 530 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 IL3P08700 152 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TLX1P31314 330 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RYKP34925 604 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 IFNGR2P38484 337 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPS3AP61247 264 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 NCS1P62166 190 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZXDBP98169 803 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TARDBPQ13148 414 aaKnown RBP eCLIP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PPIGQ13427 754 aaKnown RBP eCLIP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SMU1Q2TAY7 513 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 UAP1L1Q3KQV9 507 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TBPL2Q6SJ96 375 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PLET1Q6UQ28 207 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RNF130Q86XS8 419 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RASGEF1AQ8N9B8 481 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR13F1Q8NGS4 319 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM110BQ8TC76 370 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPL3LQ92901 407 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FOXJ1Q92949 421 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 USP7Q93009 1102 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF300Q96RE9 604 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CPPED1Q9BRF8 314 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRIT1Q9H3H1 467 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 WDR26Q9H7D7 661 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF232Q9UNY5 417 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PDPK1O15530 556 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FGF19O95750 216 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PRR35P0CG20 571 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALPPL2P10696 532 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 NOS3P29474 1203 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCT3P49368 545 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPS26P62854 115 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 HNRNPA1L2Q32P51 320 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FRMPD2BQ6IN97 320 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM180BQ6P0A1 224 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM92BQ6ZTR7 304 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CDK20Q8IZL9 346 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TMEM145Q8NBT3 493 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR8J1Q8NGP2 316 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RASSF5Q8WWW0 418 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 LCN9Q8WX39 176 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TAMM41Q96BW9 452 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 NEUROD4Q9HD90 331 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC25A37Q9NYZ2 338 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 RHCGQ9UBD6 479 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR51B4Q9Y5P0 310 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 LRRC37AA6NMS7 1700 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SOX14O95416 240 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 B3GALT4O96024 378 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 H1F0P07305 194 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GSTM2P28161 218 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CRISP3P54108 245 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PHC1P78364 1004 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ADARB1P78563 741 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GSTM4Q03013 218 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF33BQ06732 778 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 NFE2L1Q14494 772 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 UGT8Q16880 541 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ATAT1Q5SQI0 421 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PSRC1Q6PGN9 363 aaPredicted RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 NEK10Q6ZWH5 1172 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CENPSQ8N2Z9 138 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRUB1Q8WWH5 349 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 KCNC2Q96PR1 638 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALPK1Q96QP1 1244 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 EPYCQ99645 322 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SMAD5Q99717 465 aaKnown RBP5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 C17orf62Q9BQA9 187 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCDC3Q9BQI4 270 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 LHPPQ9H008 270 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC28A3Q9HAS3 691 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TMEM98Q9Y2Y6 226 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ST14Q9Y5Y6 855 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ENPP4Q9Y6X5 453 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GLOD5A6NK44 160 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ADH5P11766 374 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TNFRSF1BP20333 461 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 ISL1P61371 349 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 VBP1P61758 197 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 PROX2Q3B8N5 592 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 GPAT3Q53EU6 434 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 SERPINA11Q86U17 422 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 OXR1Q8N573 874 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms