RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 WDR83Q9BRX9 315 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLC6A16Q9GZN6 736 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 SNX12Q9UMY4 172 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 CHMP2BQ9UQN3 213 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 DYRK1BQ9Y463 629 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 CACNA1CQ13936 2221 aa19.47■□□□□ 0.71
TRAPPC3-208ENST00000616074 SAGE2PA6NJ88 616 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 C4orf51C9J302 202 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 PRMT3O60678 531 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLC25A12O75746 678 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 COX6B1P14854 86 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 MAOAP21397 527 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 IVDP26440 423 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 ELK3P41970 407 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 HSF1Q00613 529 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 MAPKAPK3Q16644 382 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 NCCRP1Q6ZVX7 275 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 TMPRSS11BQ86T26 416 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 THOC6Q86W42 341 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 ZNF227Q86WZ6 799 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 SLCO2A1Q92959 643 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 PDLIM5Q96HC4 596 aaKnown RBP19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 TRIM51Q9BSJ1 452 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 KLHL31Q9H511 634 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 PELI2Q9HAT8 420 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 MEMO1Q9Y316 297 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 ADGRG4Q8IZF6 3080 aa19.46■□□□□ 0.71
TRAPPC3-208ENST00000616074 IGKV3D-11A0A0A0MRZ8 115 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 TCRBV16S1A1N1A0A5B0 115 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 CES2O00748 559 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 ASNA1O43681 348 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 NME2P1O60361 137 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 SMIM10L1P0DMW3 83 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZNF37AP17032 561 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 AGAP20933 346 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 NME2P22392 152 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 SMSP52788 366 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 MLF1P58340 268 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 RNFT1Q5M7Z0 435 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 NXPE4Q6UWF7 544 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 CPSF7Q8N684 471 aaKnown RBP19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 NFAM1Q8NET5 270 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 SMIM10Q96HG1 83 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 AIF1LQ9BQI0 150 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 AICDAQ9GZX7 198 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 RHBGQ9H310 441 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 NECTIN3Q9NQS3 549 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 SLC22A14Q9Y267 594 aa19.45■□□□□ 0.7
TRAPPC3-208ENST00000616074 URADA6NGE7 173 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 A8MUA0 341 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 C19orf84I3L1E1 186 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CDC7O00311 574 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CDK2AP1O14519 115 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 RNH1P13489 461 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZNF24P17028 368 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CYB561P49447 251 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 RBBP5Q15291 538 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 STEAP4Q687X5 459 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CHERPQ8IWX8 916 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 PDIK1LQ8N165 341 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CA13Q8N1Q1 262 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 GHDCQ8N2G8 530 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 TRPV3Q8NET8 790 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 PHF12Q96QT6 1004 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 TRIM8Q9BZR9 551 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 TRIM45Q9H8W5 580 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 CLK4Q9HAZ1 481 aaKnown RBP19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 PRDM9Q9NQV7 894 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 PSAT1Q9Y617 370 aa19.44■□□□□ 0.7
TRAPPC3-208ENST00000616074 NPEPPSL1A6NEC2 478 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 PSMD12O00232 456 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 ABOP16442 354 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 POU3F2P20265 443 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 SAT1P21673 171 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 TRHRP34981 398 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 ITGA8P53708 1063 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZNF460Q14592 562 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 MORF4L2Q15014 288 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 TOR1AIP1Q5JTV8 583 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 CREB3L4Q8TEY5 395 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 AGAP11Q8TF27 550 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZFATQ9P243 1243 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 TEX264Q9Y6I9 313 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 CELSR1Q9NYQ6 3014 aa19.43■□□□□ 0.7
TRAPPC3-208ENST00000616074 CLDN14O95500 239 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 SERPINA6P08185 405 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 HLCSP50747 726 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 FGD2Q7Z6J4 655 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 MTFMTQ96DP5 389 aaKnown RBP19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 LURAP1Q96LR2 239 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 DEFB126Q9BYW3 111 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 ASB1Q9Y576 335 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 KCNE2Q9Y6J6 123 aa19.42■□□□□ 0.7
TRAPPC3-208ENST00000616074 FCHO1O14526 889 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 CDKL1Q00532 357 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 C3P1Q6ZMU1 363 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZC3HC1Q86WB0 502 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 DOLPP1Q86YN1 238 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 ZNF295-AS1Q8N0V1 137 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms