RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 FAM9CQ8IZT9 166 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 SRFBP1Q8NEF9 429 aaKnown RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 QRFPRQ96P65 431 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ZNF717Q9BY31 904 aaPredicted RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 TXLNGQ9NUQ3 528 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 SIRT5Q9NXA8 310 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 MCM8Q9UJA3 840 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 PLCL2Q9UPR0 1127 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 URADA6NGE7 173 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ANKRD28O15084 1053 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ZSCAN9O15535 394 aaPredicted RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 GDF9O60383 454 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 CTSBP07858 339 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ZNF888P0CJ79 500 aaPredicted RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 CALB2P22676 271 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ACP1P24666 158 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ZNF763Q0D2J5 394 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 RP9Q8TA86 221 aaKnown RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 NUDT8Q8WV74 236 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 GAL3ST3Q96A11 431 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ZBTB18Q99592 522 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 AKAP10O43572 662 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 SRPX2O60687 465 aaPredicted RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 B3GALT4O96024 378 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 SNRPB2P08579 225 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 JAK1P23458 1154 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TPP2P29144 1249 aaPredicted RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 PRDX6P30041 224 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 POLR2JP52435 117 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 KCNK10P57789 538 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 CCDC157Q569K6 752 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 YTHDF3Q7Z739 585 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 OR8K5Q8NH50 307 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TEFMQ96QE5 360 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 DPYSL5Q9BPU6 564 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TBCDQ9BTW9 1192 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 CHRNA10Q9GZZ6 450 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 ZNF768Q9H5H4 540 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 COL5A1P20908 1838 aaPredicted RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 IGHV5-10-1A0A0J9YXX1 117 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 AGRPO00253 132 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TOX3O15405 576 aaPredicted RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 UNC5CO95185 931 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 GP1BAP07359 652 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TGM1P22735 817 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 IL12AP29459 219 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 ASMTP46597 345 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 MAPK12P53778 367 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 CLDN8P56748 225 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 BTN3A2P78410 334 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 HERC3Q15034 1050 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 TMTC4Q5T4D3 741 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 ZNF793Q6ZN11 406 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 ABHD13Q7L211 337 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 KMT5CQ86Y97 462 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 RCBTB1Q8NDN9 531 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 UTP15Q8TED0 518 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 SLC41A2Q96JW4 573 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 COPS7BQ9H9Q2 264 aaPredicted RBP16.69■□□□□ 0.26
SREK1-216ENST00000612404 SEMA5BQ9P283 1151 aa16.69■□□□□ 0.26
SREK1-216ENST00000612404 FAM234BA2RU67 622 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 DLL1O00548 723 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 NELFEP18615 380 aaKnown RBP16.68■□□□□ 0.26
SREK1-216ENST00000612404 GABRA4P48169 554 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 TAS2R50P59544 299 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 MXRA7P84157 204 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 SPIDRQ14159 915 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 VPS26BQ4G0F5 336 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 BLOC1S3Q6QNY0 202 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 D2HGDHQ8N465 521 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 AMER3Q8N944 861 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 C16orf78Q8WTQ4 265 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 KLHL6Q8WZ60 621 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 CCDC74BQ96LY2 380 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 SLC25A23Q9BV35 468 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 PRDM7Q9NQW5 492 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 ADAM29Q9UKF5 820 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 SCN3AQ9NY46 2000 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 SPTBP11277 2137 aa16.68■□□□□ 0.26
SREK1-216ENST00000612404 TXNDC9O14530 226 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 ATP5HO75947 161 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 PCSK2P16519 638 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
SREK1-216ENST00000612404 CERS1P27544 350 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 SNRPNP63162 240 aaKnown RBP16.67■□□□□ 0.26
SREK1-216ENST00000612404 RCAN2Q14206 197 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 GPR19Q15760 415 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 MMEL1Q495T6 779 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 DEFB134Q4QY38 66 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
SREK1-216ENST00000612404 MANEAQ5SRI9 462 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 PHF19Q5T6S3 580 aa16.67■□□□□ 0.26
SREK1-216ENST00000612404 TMEM132CQ8N3T6 1108 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms