RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CEACAM5P06731 702 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 DDCP20711 480 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 TPP2P29144 1249 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CDK9P50750 372 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ARFIP1P53367 373 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ITGA1P56199 1179 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 MEF2AQ02078 507 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 GAB1Q13480 694 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 FGL2Q14314 439 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF630Q2M218 657 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZIK1Q3SY52 487 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 GCNT6Q5T4J0 391 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CCDC80Q76M96 950 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CHST15Q7LFX5 561 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 DCP2Q8IU60 420 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZC3H7AQ8IWR0 971 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 OR2L8Q8NGY9 312 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 OR14C36Q8NHC7 312 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 LZICQ8WZA0 190 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 RGMAQ96B86 450 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SCARF2Q96GP6 870 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 HSH2DQ96JZ2 352 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CNDP2Q96KP4 475 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 C12orf66Q96MD2 445 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 FERD3LQ96RJ6 166 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 MBOAT4Q96T53 435 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SLC35A5Q9BS91 424 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 DOHHQ9BU89 302 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SMURF2Q9HAU4 748 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 RSL24D1Q9UHA3 163 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 UTS2RQ9UKP6 389 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PADI2Q9Y2J8 665 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 MAGED1Q9Y5V3 778 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 HEBP2Q9Y5Z4 205 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 HSPE1-MOB4S4R3N1 261 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 DOCK9Q9BZ29 2069 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 HEATR5BQ9P2D3 2071 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 A0A1W2PPV9 198 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 A0A1W2PRB8 838 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ANTXRLA6NF34 631 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SAP18O00422 153 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PLPP1O14494 284 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 RNGTTO60942 597 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CLEC3AO75596 197 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 KLHL18O94889 574 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CLIC3O95833 236 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 C6orf47O95873 294 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ACP5P13686 325 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 UQCRC2P22695 453 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 RYKP34925 604 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CRATP43155 626 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PRIM2P49643 509 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 MVDP53602 400 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 MAPK12P53778 367 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 IST1P53990 364 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SELENOWP63302 87 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ABATP80404 500 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PRDX1Q06830 199 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 KCNAB2Q13303 367 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM35AQ53FP2 167 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF773Q6PK81 442 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 USP30Q70CQ3 517 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 NAGSQ8N159 534 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D19Q8N5T2 526 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 SETD9Q8NE22 299 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 PIK3C3Q8NEB9 887 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 NMD3Q96D46 503 aaKnown RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CAMK1GQ96NX5 476 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF347Q96SE7 839 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 INSM2Q96T92 566 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 DPH2Q9BQC3 489 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ACAT2Q9BWD1 397 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 REEP1Q9H902 201 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
USP6NL-206ENST00000609853 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.43□□□□□ -0.58
USP6NL-206ENST00000609853 H3BSA7 217 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NTRK1P04629 796 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 IL3P08700 152 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 IGFBP5P24593 272 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 RPL10P27635 214 aaKnown RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 PKLRP30613 574 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 BSGP35613 385 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 GRK3P35626 688 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 CHI3L1P36222 383 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 ADPRHP54922 357 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 CDH15P55291 814 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TPD52P55327 224 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 SEC13P55735 322 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 PLCL1Q15111 1095 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 UAP1L1Q3KQV9 507 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM196Q5HYL7 178 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 CWF19L1Q69YN2 538 aaKnown RBP11.42□□□□□ -0.58
USP6NL-206ENST00000609853 KDM4DQ6B0I6 523 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM179BQ7Z7N9 219 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 NUDT13Q86X67 352 aa11.42□□□□□ -0.58
USP6NL-206ENST00000609853 CACUL1Q86Y37 369 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms