RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MIEF2Q96C03 454 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 MS4A6EQ96DS6 147 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 PANX1Q96RD7 426 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 BHLHE41Q9C0J9 482 aaPredicted RBP20.58■□□□□ 0.89
USP6NL-204ENST00000606752 KLHL31Q9H511 634 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 SLC6A13Q9NSD5 602 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 BTNL2Q9UIR0 455 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 VCANP13611 3396 aa20.58■□□□□ 0.88
USP6NL-204ENST00000606752 SNRNP200O75643 2136 aaKnown RBP20.58■□□□□ 0.88
USP6NL-204ENST00000606752 GOLGA4Q13439 2230 aaKnown RBP20.58■□□□□ 0.88
USP6NL-204ENST00000606752 A0A1B0GTW7 788 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 ANP32DO95626 131 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 IL3P08700 152 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 GNSP15586 552 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 HOXB9P17482 250 aaPredicted RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 CDKN2CP42773 168 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 LRRC74AQ0VAA2 488 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SIM2Q14190 667 aaPredicted RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 DEFB133Q30KQ1 61 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 GTDC1Q4AE62 458 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 PMS2CLQ68D20 193 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 FCRL6Q6DN72 434 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 IFNEQ86WN2 208 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SRFBP1Q8NEF9 429 aaKnown RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 GAB3Q8WWW8 586 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 PPCDCQ96CD2 204 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 TM4SF18Q96CE8 201 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 THAP11Q96EK4 314 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 MACROD1Q9BQ69 325 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 ECSITQ9BQ95 431 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 THUMPD3Q9BV44 507 aaKnown RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 MUC13Q9H3R2 512 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SYNPO2LQ9H987 977 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 A0A0J9YY10 115 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SDC3O75056 442 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 HTR1EP28566 365 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SSR2P43308 183 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 STXBP1P61764 594 aaKnown RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 KLHL35Q6PF15 583 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 VN1R4Q7Z5H5 301 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SPATA24Q86W54 205 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 PTRH1Q86Y79 214 aaKnown RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 MAML2Q8IZL2 1156 aaPredicted RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 OR2L5Q8NG80 312 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 CCDC115Q96NT0 180 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 KCNC2Q96PR1 638 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 TEFMQ96QE5 360 aaKnown RBP20.57■□□□□ 0.88
USP6NL-204ENST00000606752 OR2A5Q96R48 311 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 C17orf62Q9BQA9 187 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 UCKL1Q9NWZ5 548 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 ACTR3BQ9P1U1 418 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 STOML1Q9UBI4 398 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 PILRAQ9UKJ1 303 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 TECTAO75443 2155 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 SDK1Q7Z5N4 2213 aa20.57■□□□□ 0.88
USP6NL-204ENST00000606752 RNASET2O00584 256 aaKnown RBP20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ERI3O43414 337 aaKnown RBP20.56■□□□□ 0.88
USP6NL-204ENST00000606752 CTSVO60911 334 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 STATHP02808 62 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 GSNP06396 782 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ANPEPP15144 967 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 TYRP1P17643 537 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 CTSKP43235 329 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 LSSP48449 732 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 TRA2BP62995 288 aaKnown RBP20.56■□□□□ 0.88
USP6NL-204ENST00000606752 SRSF5Q13243 272 aaKnown RBP20.56■□□□□ 0.88
USP6NL-204ENST00000606752 BIRC2Q13490 618 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF385BQ569K4 471 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 TOR1AIP1Q5JTV8 583 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ZFP1Q6P2D0 407 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ABHD17CQ6PCB6 329 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ASPGQ86U10 573 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 BAHD1Q8TBE0 780 aaPredicted RBP20.56■□□□□ 0.88
USP6NL-204ENST00000606752 RSC1A1Q92681 617 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 LRGUKQ96M69 825 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 FCRL4Q96PJ5 515 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 SLC6A16Q9GZN6 736 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 EGFL7Q9UHF1 273 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 ANGPTL2Q9UKU9 493 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 THADAQ6YHU6 1953 aa20.56■□□□□ 0.88
USP6NL-204ENST00000606752 A0A0A6YYD5 115 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TMPRSS11DO60235 418 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 UBXN7O94888 489 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 MRPS22P82650 360 aaKnown RBP20.55■□□□□ 0.88
USP6NL-204ENST00000606752 KLC1Q07866 573 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 RGS1Q08116 209 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 HEPACAMQ14CZ8 416 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 CLECL1Q8IZS7 167 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 NT5CQ8TCD5 201 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TM4SF19Q96DZ7 209 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF583Q96ND8 569 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 CPPED1Q9BRF8 314 aaPredicted RBP20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TBCDQ9BTW9 1192 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 IKZF5Q9H5V7 419 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 MIEF1Q9NQG6 463 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 PRDM7Q9NQW5 492 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 EVA1BQ9NVM1 165 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 POMT2Q9UKY4 750 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ERVK-11Q9UQG0 969 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms