RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GRNP28799 593 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 TPP2P29144 1249 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 EEF1DP29692 281 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 GDF5P43026 501 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 HNMTP50135 292 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 MLF1P58340 268 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 GNG11P61952 73 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 BTN3A2P78410 334 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ALDH6A1Q02252 535 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 OC90Q02509 493 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 NOTCH2Q04721 2471 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ZNF460Q14592 562 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 FASTKD3Q14CZ7 662 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 MAPKAPK3Q16644 382 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 C18orf21Q32NC0 220 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 TOR1AIP1Q5JTV8 583 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ZNF468Q5VIY5 522 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 SLC25A25Q6KCM7 469 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 MTFR2Q6P444 385 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SLCO4C1Q6ZQN7 724 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 QSOX2Q6ZRP7 698 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 GALNTL5Q7Z4T8 443 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 MRGPRGQ86SM5 289 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 TMPRSS11BQ86T26 416 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SPPL2CQ8IUH8 684 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 CEP97Q8IW35 865 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SRRM1Q8IYB3 904 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 LGI4Q8N135 537 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ZNF808Q8N4W9 903 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 HORMAD2Q8N7B1 307 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 TMEM178AQ8NBL3 297 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 FBXO36Q8NEA4 188 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ADAMTS18Q8TE60 1221 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 THAP3Q8WTV1 239 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 RHBDF1Q96CC6 855 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 GPR137Q96N19 417 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 FRMD6Q96NE9 622 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 EGFL8Q99944 293 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 TRIM31Q9BZY9 425 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 TRIM45Q9H8W5 580 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 GRPEL1Q9HAV7 217 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 NECTIN3Q9NQS3 549 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 PRDM9Q9NQV7 894 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 LRFN1Q9P244 771 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SUCOQ9UBS9 1254 aaKnown RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 CTNNAL1Q9UBT7 734 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 ZNF835Q9Y2P0 537 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 SNX24Q9Y343 169 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 OARD1Q9Y530 152 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 KLF2Q9Y5W3 355 aaPredicted RBP7.14□□□□□ -1.27
CUX1-219ENST00000606749 SAR1BQ9Y6B6 198 aa7.14□□□□□ -1.27
CUX1-219ENST00000606749 TCRBV16S1A1N1A0A5B0 115 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 LRIT2A6NDA9 550 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 SAGE2PA6NJ88 616 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 EFCAB8A8MWE9 144 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 C4orf51C9J302 202 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 NPIPA5E9PKD4 350 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 CCDC188H7C350 402 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 PSMD12O00232 456 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 ASNA1O43681 348 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 PIAS1O75925 651 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 WDR47O94967 919 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 WISP3O95389 354 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 MLYCDO95822 493 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 GNAZP19086 355 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 TRHRP34981 398 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 PAFAH1B1P43034 410 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 RPL21P46778 160 aaKnown RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 SLC6A12P48065 614 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 CYB561P49447 251 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 CASP6P55212 293 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 STXBP1P61764 594 aaKnown RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 POU4F1Q01851 419 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 RUNX2Q13950 521 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 TSNQ15631 228 aaKnown RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 C3AR1Q16581 482 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 ZNF630Q2M218 657 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 RNFT1Q5M7Z0 435 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 XKRXQ6PP77 449 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 TMIGD1Q6UXZ0 262 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 BNC2Q6ZN30 1099 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 Q6ZPB1 254 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 ZNF227Q86WZ6 799 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 SIAH3Q8IW03 269 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 KLHDC8AQ8IYD2 350 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 ZBED8Q8IZ13 594 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 CA13Q8N1Q1 262 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 ARMC10Q8N2F6 343 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 SPATA6LQ8N4H0 392 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 APCDD1LQ8NCL9 501 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 MS4A6EQ96DS6 147 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 VPS39Q96JC1 886 aa7.13□□□□□ -1.27
CUX1-219ENST00000606749 NAPGQ99747 312 aaPredicted RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 UNKQ9C0B0 810 aaKnown RBP7.13□□□□□ -1.27
CUX1-219ENST00000606749 DERL2Q9GZP9 239 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms