RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SLC24A4Q8NFF2 622 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 OR5T2Q8NGG2 359 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 OR6M1Q8NGM8 313 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MCFD2Q8NI22 146 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CPT1CQ8TCG5 803 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SETD7Q8WTS6 366 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CACNG8Q8WXS5 425 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 FBXL20Q96IG2 436 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 LINC00615Q96LM1 132 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CGRRF1Q99675 332 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 FEM1AQ9BSK4 669 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 DGCR6LQ9BY27 220 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MRPL4Q9BYD3 311 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 GANQ9H2C0 597 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ANKHQ9HCJ1 492 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 BIN3Q9NQY0 253 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 COPZ2Q9P299 210 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MLXQ9UH92 298 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NENFQ9UMX5 172 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CDY2AQ9Y6F7 541 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 IGSF9BQ9UPX0 1349 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TAF1LQ8IZX4 1826 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TAF1P21675 1872 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SCN7AQ01118 1682 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TNRC6CQ9HCJ0 1690 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 A0A075B6Q4 140 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MEIOCA2RUB1 952 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TMEM210A6NLX4 147 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF213O14771 459 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 AIM2O14862 343 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CFLARO15519 480 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 IPO13O94829 963 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CLIC3O95833 236 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PCCAP05165 728 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CKMP06732 381 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KLK3P07288 261 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SMIM6P0DI80 62 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PKMP14618 531 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 FOSL2P15408 326 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 EPHA1P21709 976 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CRHR1P34998 444 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CSNK1DP48730 415 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF157P51786 506 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CTSWP56202 376 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KCNK10P57789 538 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 DCDC1P59894 354 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SRSF2Q01130 221 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SLC3A1Q07837 685 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SLAMF1Q13291 335 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TRAM2Q15035 370 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SIX1Q15475 284 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CHI3L2Q15782 390 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KNOP1Q1ED39 458 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 XKR4Q5GH76 650 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PIGGQ5H8A4 983 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ARMCX4Q5H9R4 360 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MANEALQ5VSG8 457 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 XAF1Q6GPH4 301 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NADSYN1Q6IA69 706 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PNCKQ6P2M8 343 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 AFTPHQ6ULP2 937 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SERPINA12Q8IW75 414 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SLC22A15Q8IZD6 547 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ADGRF4Q8IZF3 695 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TCTE3Q8IZS6 198 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ZCCHC9Q8N567 271 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 DTWD1Q8N5C7 304 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PACRGLQ8N7B6 248 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SETD9Q8NE22 299 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 GLIS3Q8NEA6 775 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 OR13J1Q8NGT2 312 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SCAMP5Q8TAC9 235 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 FAR1Q8WVX9 515 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 C18orf25Q96B23 403 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PPWD1Q96BP3 646 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TSPAN17Q96FV3 270 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 C5orf30Q96GV9 206 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MYRFLQ96LU7 910 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NECTIN4Q96NY8 510 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 DMRTA2Q96SC8 542 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MMP19Q99542 508 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 APOL4Q9BPW4 351 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TEKT3Q9BXF9 490 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 GLIS2Q9BZE0 524 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 BHLHE41Q9C0J9 482 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SHARPINQ9H0F6 387 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CD320Q9NPF0 282 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NIT2Q9NQR4 276 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 COL20A1Q9P218 1284 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 RCOR3Q9P2K3 495 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ABCD2Q9UBJ2 740 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TJP2Q9UDY2 1190 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 GPN3Q9UHW5 284 aaPredicted RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 RUVBL2Q9Y230 463 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PCDHB14Q9Y5E9 798 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ALG6Q9Y672 507 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
LINC01109-201ENST00000603837 EFCAB7A8K855 629 aa4.55□□□□□ -1.68
LINC01109-201ENST00000603837 METTL12A8MUP2 240 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms