RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NDUFA9Q16795 377 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 AP5B1Q2VPB7 878 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 FAM214AQ32MH5 1076 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 GARNL3Q5VVW2 1013 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 ABHD17CQ6PCB6 329 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 TMEM126BQ8IUX1 230 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 METTL4Q8N3J2 472 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 SRFBP1Q8NEF9 429 aaKnown RBP19.44■□□□□ 0.7
PNKP-215ENST00000600910 PMEPA1Q969W9 287 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 RNF31Q96EP0 1072 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 PPP3R2Q96LZ3 170 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 KCNC2Q96PR1 638 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 ELAC2Q9BQ52 826 aaKnown RBP19.44■□□□□ 0.7
PNKP-215ENST00000600910 NDC1Q9BTX1 674 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 SORBS1Q9BX66 1292 aaKnown RBP19.44■□□□□ 0.7
PNKP-215ENST00000600910 CUTCQ9NTM9 273 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 C1orf109Q9NX04 203 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 KLHL14Q9P2G3 628 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 SLC22A7Q9Y694 548 aa19.44■□□□□ 0.7
PNKP-215ENST00000600910 VPS4BO75351 444 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 SCRG1O75711 98 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 B3GALT4O96024 378 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 SMIM10L1P0DMW3 83 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ALOX12P18054 663 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 GCGRP47871 477 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 EMP3P54852 163 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 RAB15P59190 212 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 TGM3Q08188 693 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 MUM1Q2TAK8 710 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 DEFB134Q4QY38 66 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 SPIN4Q56A73 249 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 C6orf136Q5SQH8 315 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 LARP4Q71RC2 724 aaKnown RBP eCLIP19.43■□□□□ 0.7
PNKP-215ENST00000600910 PRSS41Q7RTY9 318 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 C1orf52Q8N6N3 182 aaKnown RBP19.43■□□□□ 0.7
PNKP-215ENST00000600910 CHTF18Q8WVB6 975 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 SMIM10Q96HG1 83 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 OR52B2Q96RD2 323 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 TMEM120AQ9BXJ8 343 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ZNF717Q9BY31 904 aaPredicted RBP19.43■□□□□ 0.7
PNKP-215ENST00000600910 LHX9Q9NQ69 397 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 AHSPQ9NZD4 102 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 PRR35P0CG20 571 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 IL1RNP18510 177 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ARSFP54793 590 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 RPL38P63173 70 aaKnown RBP19.43■□□□□ 0.7
PNKP-215ENST00000600910 ACSM2AQ08AH3 577 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 HERC3Q15034 1050 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 KIAA0040Q15053 153 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.43■□□□□ 0.7
PNKP-215ENST00000600910 RFTN2Q52LD8 501 aaPredicted RBP19.43■□□□□ 0.7
PNKP-215ENST00000600910 DCAF12Q5T6F0 453 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ACSM2BQ68CK6 577 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 NXNQ6DKJ4 435 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 OR4C11Q6IEV9 310 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 CEACAM20Q6UY09 585 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 TTLL10Q6ZVT0 673 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ACAD11Q709F0 780 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 COMMD6Q7Z4G1 85 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 ZFAND4Q86XD8 727 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 DTWD1Q8N5C7 304 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 TAAR9Q96RI9 348 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 SLC7A5P2Q9GIP4 190 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 PRDM7Q9NQW5 492 aa19.43■□□□□ 0.7
PNKP-215ENST00000600910 DHCR7Q9UBM7 475 aaKnown RBP19.43■□□□□ 0.7
PNKP-215ENST00000600910 BSGP35613 385 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 SSR2P43308 183 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 ARFIP2P53365 341 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 ARFIP1P53367 373 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 BTN3A2P78410 334 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 FAM53BQ14153 422 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 LSM12Q3MHD2 195 aaKnown RBP19.42■□□□□ 0.7
PNKP-215ENST00000600910 YOD1Q5VVQ6 348 aaPredicted RBP19.42■□□□□ 0.7
PNKP-215ENST00000600910 ZNF793Q6ZN11 406 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 SPATA21Q7Z572 469 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 PDSS2Q86YH6 399 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 FNDC5Q8NAU1 212 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 ACTRT2Q8TDY3 377 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 C11orf24Q96F05 449 aaPredicted RBP19.42■□□□□ 0.7
PNKP-215ENST00000600910 TEFMQ96QE5 360 aaKnown RBP19.42■□□□□ 0.7
PNKP-215ENST00000600910 CCT8L2Q96SF2 557 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 TBCDQ9BTW9 1192 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 ACTR5Q9H9F9 607 aaPredicted RBP19.42■□□□□ 0.7
PNKP-215ENST00000600910 ANKHQ9HCJ1 492 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 TCF7L2Q9NQB0 619 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 SRPK3Q9UPE1 567 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 NAALAD2Q9Y3Q0 740 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 PCDHB3Q9Y5E6 796 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 B3GALT1Q9Y5Z6 326 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 KNTC1P50748 2209 aa19.42■□□□□ 0.7
PNKP-215ENST00000600910 A0A0A6YYC8 382 aaPredicted RBP19.41■□□□□ 0.7
PNKP-215ENST00000600910 I3L1I5 382 aaPredicted RBP19.41■□□□□ 0.7
PNKP-215ENST00000600910 FOXS1O43638 330 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 GBAP04062 536 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 NTRK1P04629 796 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 LBPP18428 481 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 ALAS2P22557 587 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 TSFMP43897 325 aaKnown RBP19.41■□□□□ 0.7
PNKP-215ENST00000600910 NUDT13Q86X67 352 aa19.41■□□□□ 0.7
PNKP-215ENST00000600910 AMER3Q8N944 861 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms