RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 ADPRMQ3LIE5 342 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 GARNL3Q5VVW2 1013 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 ZNF385CQ66K41 422 aaPredicted RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 RHBDD2Q6NTF9 364 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 TIPARPQ7Z3E1 657 aaKnown RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 DTWD1Q8N5C7 304 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 RAB3IL1Q8TBN0 382 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 METTL6Q8TCB7 284 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 NDC1Q9BTX1 674 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 MS4A8Q9BY19 250 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 NLNQ9BYT8 704 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 ULBP3Q9BZM4 244 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 C20orf27Q9GZN8 174 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 KLHL31Q9H511 634 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 DMRT3Q9NQL9 472 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 DHCR7Q9UBM7 475 aaKnown RBP17.91■□□□□ 0.46
CCDC9-205ENST00000600117 ADGRE2Q9UHX3 823 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 SRPK3Q9UPE1 567 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 TIMM22Q9Y584 194 aa17.91■□□□□ 0.46
CCDC9-205ENST00000600117 MAGEB17A8MXT2 336 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 C4orf51C9J302 202 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 MANBAO00462 879 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 DSCR3O14972 297 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 EFSO43281 561 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 FOXS1O43638 330 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 ITGB2P05107 769 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SMIM10L1P0DMW3 83 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 NEFHP12036 1026 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 HMOX2P30519 316 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 HNRNPH1P31943 449 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 ARSFP54793 590 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 RGS1Q08116 209 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 STX3Q13277 289 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 DDX39BQ13838 428 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 FAM214AQ32MH5 1076 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 TOR1AIP1Q5JTV8 583 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 ZFAND4Q86XD8 727 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 CCT6BQ92526 530 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SMIM10Q96HG1 83 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 LRFN5Q96NI6 719 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SORT1Q99523 831 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 MTERF1Q99551 399 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 ARHGAP9Q9BRR9 750 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 EML4Q9HC35 981 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 FARSBQ9NSD9 589 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 INTS9Q9NV88 658 aaKnown RBP17.9■□□□□ 0.46
CCDC9-205ENST00000600117 PPT2Q9UMR5 302 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SNX6Q9UNH7 406 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SLC22A7Q9Y694 548 aa17.9■□□□□ 0.46
CCDC9-205ENST00000600117 SEC16AO15027 2179 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 LRIT2A6NDA9 550 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 FOXE1O00358 373 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 SNNO75324 88 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ETHE1O95571 254 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 PDYNP01213 254 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 FGF4P08620 206 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 HBQ1P09105 142 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 SFTPCP11686 197 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ITGAXP20702 1163 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 CD82P27701 267 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 SERPINB3P29508 390 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 SLC1A6P48664 564 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ATP1A2P50993 1020 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 RPS13P62277 151 aaKnown RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 IFT88Q13099 833 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 MUM1Q2TAK8 710 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 C10orf62Q5T681 223 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 TTC19Q6DKK2 380 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 CLEC6AQ6EIG7 209 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 TTLL10Q6ZVT0 673 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 TRIM42Q8IWZ5 723 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 AFAP1L2Q8N4X5 818 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 GALNT6Q8NCL4 622 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ZCCHC10Q8TBK6 192 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 UTP15Q8TED0 518 aaKnown RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF75CPQ92670 426 aaPredicted RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 MTFMTQ96DP5 389 aaKnown RBP17.89■□□□□ 0.45
CCDC9-205ENST00000600117 MS4A6EQ96DS6 147 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 GBP5Q96PP8 586 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ELOVL6Q9H5J4 265 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 MANSC1Q9H8J5 431 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 PSD3Q9NYI0 1048 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 ZDHHC2Q9UIJ5 367 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 HAO1Q9UJM8 370 aa17.89■□□□□ 0.45
CCDC9-205ENST00000600117 A0A1B0GX78 115 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 TMEM233B4DJY2 109 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 KLF11O14901 512 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 AZIN1O14977 448 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 HSPA4LO95757 839 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 TGFB1P01137 390 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 KRT6AP02538 564 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 KRT6BP04259 564 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF888P0CJ79 500 aaPredicted RBP17.88■□□□□ 0.45
CCDC9-205ENST00000600117 UROSP10746 265 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 KRT6CP48668 564 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 FAM53BQ14153 422 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 MAP7Q14244 749 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 NDUFA9Q16795 377 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 SGO1Q5FBB7 561 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms