RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZXDCQ2QGD7 858 aaPredicted RBP17.63■□□□□ 0.41
PNKP-213ENST00000599543 DEFB134Q4QY38 66 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 ZNF766Q5HY98 468 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 PAPD4Q6PIY7 484 aaKnown RBP17.63■□□□□ 0.41
PNKP-213ENST00000599543 CYS1Q717R9 158 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 AFAP1L2Q8N4X5 818 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 OR4K1Q8NGD4 311 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 OR5T3Q8NGG3 340 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 M1APQ8TC57 530 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 ANKRD49Q8WVL7 239 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 SLC5A11Q8WWX8 675 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 NEIL2Q969S2 332 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 MOCOSQ96EN8 888 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 LPAR4Q99677 370 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 PCNX1Q96RV3 2341 aa17.63■□□□□ 0.41
PNKP-213ENST00000599543 ABCA12Q86UK0 2595 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 MAGEB17A8MXT2 336 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 GALR3O60755 368 aaPredicted RBP17.62■□□□□ 0.41
PNKP-213ENST00000599543 SLU7O95391 586 aaKnown RBP17.62■□□□□ 0.41
PNKP-213ENST00000599543 FHP07954 510 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 ZNF37AP17032 561 aaPredicted RBP17.62■□□□□ 0.41
PNKP-213ENST00000599543 ALOX12P18054 663 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 JAK1P23458 1154 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 PHBP35232 272 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 MEP1AQ16819 746 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 CATSPEREQ5SY80 951 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 H3F3CQ6NXT2 135 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 CEP128Q6ZU80 1094 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 ABHD13Q7L211 337 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 CMC1Q7Z7K0 106 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 RELL1Q8IUW5 271 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 SLC5A8Q8N695 610 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 PLPP5Q8NEB5 264 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 TSLPQ969D9 159 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 TBC1D20Q96BZ9 403 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 TSNARE1Q96NA8 513 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 MMP25Q9NPA2 562 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 LANCL2Q9NS86 450 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 SEC14L3Q9UDX4 400 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 ZFP69BQ9UJL9 534 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 DYRK1BQ9Y463 629 aa17.62■□□□□ 0.41
PNKP-213ENST00000599543 TRGV8A0A0C4DH27 118 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 NPEPPSL1A6NEC2 478 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 POC1B-GALNT4F8VUJ3 575 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 CDC7O00311 574 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 ZNF888P0CJ79 500 aaPredicted RBP17.61■□□□□ 0.41
PNKP-213ENST00000599543 AHRP35869 848 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 SLC12A2P55011 1212 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 TAS2R50P59544 299 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 OLR1P78380 273 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 TUBA3CQ13748 450 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 GRTP1Q5TC63 336 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 TUBA3EQ6PEY2 450 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 SBSNQ6UWP8 590 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 CRLF3Q8IUI8 442 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 SLC34A3Q8N130 599 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 NT5CQ8TCD5 201 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 RELTQ969Z4 430 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 PDLIM5Q96HC4 596 aaKnown RBP17.61■□□□□ 0.41
PNKP-213ENST00000599543 GPR22Q99680 433 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 UTP23Q9BRU9 249 aaKnown RBP17.61■□□□□ 0.41
PNKP-213ENST00000599543 TSPYL1Q9H0U9 437 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 ACSS3Q9H6R3 686 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 GPAMQ9HCL2 828 aa17.61■□□□□ 0.41
PNKP-213ENST00000599543 SUCOQ9UBS9 1254 aaKnown RBP17.61■□□□□ 0.41
PNKP-213ENST00000599543 MST1P26927 711 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 SPRP35270 261 aaPredicted RBP17.6■□□□□ 0.41
PNKP-213ENST00000599543 SCTRP47872 440 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 OR4D2P58180 307 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 REEP5Q00765 189 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 PMP22Q01453 160 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 SRSF11Q05519 484 aaKnown RBP17.6■□□□□ 0.41
PNKP-213ENST00000599543 RBPJQ06330 500 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 PPP1R3AQ16821 1122 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 MROH9Q5TGP6 573 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 TMPRSS11BQ86T26 416 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 THOC6Q86W42 341 aaKnown RBP17.6■□□□□ 0.41
PNKP-213ENST00000599543 AIF1LQ9BQI0 150 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 SPNS1Q9H2V7 528 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 PELI2Q9HAT8 420 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 ANKRD10Q9NXR5 420 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 COPG2Q9UBF2 871 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 PCDHGB6Q9Y5F9 930 aa17.6■□□□□ 0.41
PNKP-213ENST00000599543 URADA6NGE7 173 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 CHST10O43529 356 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 B4GALT2O60909 372 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 B3GALT4O96024 378 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 VSNL1P62760 191 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 POU4F1Q01851 419 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 NAB1Q13506 487 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 OR1C1Q15619 314 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.59■□□□□ 0.41
PNKP-213ENST00000599543 FRA10AC1Q70Z53 315 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 NKAPQ8N5F7 415 aaKnown RBP17.59■□□□□ 0.41
PNKP-213ENST00000599543 MDS2Q8NDY4 140 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 TRPV3Q8NET8 790 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 SIGLEC12Q96PQ1 595 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 EGFL8Q99944 293 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 TXLNGYQ9BZA5 131 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms