RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ALOX12P18054 663 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TSFMP43897 325 aaKnown RBP12.96□□□□□ -0.33
SCAF1-203ENST00000598359 SLC6A12P48065 614 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 CDKL1Q00532 357 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 POU4F1Q01851 419 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 RHAGQ02094 409 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 RGS1Q08116 209 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 HYAL2Q12891 473 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 PWP1Q13610 501 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 ABRAXAS2Q15018 415 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.337e-8■■■■□ 24.7
SCAF1-203ENST00000598359 HERC3Q15034 1050 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TLR1Q15399 786 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 BTBD16Q32M84 506 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 ADAMTSL2Q86TH1 951 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TBC1D19Q8N5T2 526 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 NT5CQ8TCD5 201 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 UTP15Q8TED0 518 aaKnown RBP12.96□□□□□ -0.33
SCAF1-203ENST00000598359 CDKL2Q92772 493 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 EXT2Q93063 718 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 RHBDF1Q96CC6 855 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 GPR22Q99680 433 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 BARD1Q99728 777 aaKnown RBP12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TMEM79Q9BSE2 394 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TUBB6Q9BUF5 446 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 DERL2Q9GZP9 239 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 RHBGQ9H310 441 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 EPB41L4BQ9H329 900 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 POPDC3Q9HBV1 291 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 TXNDC16Q9P2K2 825 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 KCNE2Q9Y6J6 123 aa12.96□□□□□ -0.33
SCAF1-203ENST00000598359 CELSR2Q9HCU4 2923 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 A0A0G2JN53 185 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 A1L4Q6 167 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 PCDH17O14917 1159 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TAPBPO15533 448 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 B4GALT2O60909 372 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 FHP07954 510 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CD1DP15813 335 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 GP5P40197 560 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 MAGEA4P43358 317 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TNFSF10P50591 281 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 ZNF33BQ06732 778 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SLBPQ14493 270 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TGFBIQ15582 683 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 NSDHLQ15738 373 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SFT2D3Q587I9 215 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TTMPQ5BVD1 217 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TOR1AIP1Q5JTV8 583 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 UBAP2Q5T6F2 1119 aaKnown RBP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SLCO4C1Q6ZQN7 724 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 RIPOR1Q6ZS17 1223 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CMC1Q7Z7K0 106 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 GPSM1Q86YR5 675 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.95□□□□□ -0.348e-7■■■■■ 185.6
SCAF1-203ENST00000598359 PPM1NQ8N819 430 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CREB3L4Q8TEY5 395 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 MRRFQ96E11 262 aaKnown RBP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 TSPAN17Q96FV3 270 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CPNE1Q99829 537 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 AIF1LQ9BQI0 150 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 PLEKHB1Q9UF11 243 aaPredicted RBP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 C19orf25Q9UFG5 118 aaPredicted RBP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 ERRFI1Q9UJM3 462 aaPredicted RBP12.95□□□□□ -0.34
SCAF1-203ENST00000598359 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 ESPL1Q14674 2120 aa12.95□□□□□ -0.34
SCAF1-203ENST00000598359 CNTRLQ7Z7A1 2325 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 E2F3O00716 465 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 MAN1A2O60476 641 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 PRAMEF4O60810 478 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 C1GALT1C1LP0DN25 315 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 STMN1P16949 149 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 AHRP35869 848 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 KCNC1P48547 511 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 HSPA7P48741 367 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 HNMTP50135 292 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 BTG2P78543 158 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 DLG1Q12959 904 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 PRAMEF9Q5VWM5 478 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 PLAG1Q6DJT9 500 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 ADNP2Q6IQ32 1131 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 PAPD4Q6PIY7 484 aaKnown RBP12.94□□□□□ -0.34
SCAF1-203ENST00000598359 ABHD13Q7L211 337 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 CCT6BQ92526 530 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 TBC1D20Q96BZ9 403 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 TMBIM4Q9HC24 238 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 WWOXQ9NZC7 414 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms