RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 NME2P1O60361 137 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLC25A12O75746 678 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 MYBL2P10244 700 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 COX6B1P14854 86 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 NME2P22392 152 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 PTGER1P34995 402 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 RFC3P40938 356 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 FNTAP49354 379 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 ITGA8P53708 1063 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 CASP6P55212 293 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 TAS2R50P59544 299 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 IL2P60568 153 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 RGS1Q08116 209 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 PWP1Q13610 501 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 PPP1R3AQ16821 1122 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 C18orf21Q32NC0 220 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 TEDDM1Q5T9Z0 273 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLC25A25Q6KCM7 469 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 MTFR2Q6P444 385 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 QSOX2Q6ZRP7 698 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 RPS19BP1Q86WX3 136 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 FBXL8Q96CD0 374 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 LURAP1Q96LR2 239 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 PTCHD1Q96NR3 888 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLC6A16Q9GZN6 736 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 PPANQ9NQ55 473 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZFP69BQ9UJL9 534 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 IGKV3D-11A0A0A0MRZ8 115 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 TCRBV16S1A1N1A0A5B0 115 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 PABPN1LA6NDY0 278 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 TGFBR3LH3BV60 316 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 CDC7O00311 574 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ASNA1O43681 348 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ABOP16442 354 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZNF24P17028 368 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZNF37AP17032 561 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 SAT1P21673 171 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 IL10P22301 178 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 JAK1P23458 1154 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 PTGER4P35408 488 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ELK3P41970 407 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 KIR3DL1P43629 444 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 NR0B1P51843 470 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 AP1S2P56377 157 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 MLF1P58340 268 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 KRTAP10-9P60411 292 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 CSHL1Q14406 222 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 TOR1AIP1Q5JTV8 583 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM45BPQ6NSW5 357 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 XKRXQ6PP77 449 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 KIAA0408Q6ZU52 694 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ABHD13Q7L211 337 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 THOC6Q86W42 341 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 LGI4Q8N135 537 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM98AQ8NCA5 519 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 NFAM1Q8NET5 270 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 SREK1Q8WXA9 508 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM129AQ9BZQ8 928 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZNF223Q9UK11 482 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLC22A14Q9Y267 594 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 ASB1Q9Y576 335 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 PSAT1Q9Y617 370 aa11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOX2-OT-228ENST00000597828 TACC2O95359 2948 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 TRBV11-1A0A0K0K1C0 115 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 ADAM10O14672 748 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 PRMT3O60678 531 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 CLDN14O95500 239 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 TTC4O95801 387 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 SMIM10L1P0DMW3 83 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 IVDP26440 423 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 AHRP35869 848 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 MEOX1P50221 254 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 HNRNPFP52597 415 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 RBBP5Q15291 538 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 KRTCAP3Q53RY4 240 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 ADNP2Q6IQ32 1131 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 GALNT7Q86SF2 657 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 DOLPP1Q86YN1 238 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 GHDCQ8N2G8 530 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 TMEM52Q8NDY8 209 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 CREB3L4Q8TEY5 395 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 SMIM10Q96HG1 83 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 TRIM54Q9BYV2 358 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms