RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 RHEBL1Q8TAI7 183 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ESAMQ96AP7 390 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CNDP1Q96KN2 507 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 PSMG3-AS1Q96PY0 264 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 LPAR4Q99677 370 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 EFCAB11Q9BUY7 163 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 NPLQ9BXD5 320 aaPredicted RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 FUT8Q9BYC5 575 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 CD244Q9BZW8 370 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 AICDAQ9GZX7 198 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 RHBGQ9H310 441 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ALG9Q9H6U8 611 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 MMP25Q9NPA2 562 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 IGSF5Q9NSI5 407 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 PLA2G3Q9NZ20 509 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 DMGDHQ9UI17 866 aaKnown RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF490Q9ULM2 529 aaPredicted RBP9.9□□□□□ -0.82
CCDC9-203ENST00000596938 NTNG1Q9Y2I2 539 aa9.9□□□□□ -0.82
CCDC9-203ENST00000596938 LRRK2Q5S007 2527 aa9.9□□□□□ -0.83
CCDC9-203ENST00000596938 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.83
CCDC9-203ENST00000596938 A0A087X1B8 175 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 TRAV17A0A0B4J275 112 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 HMX2A2RU54 273 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ANKDD1BA6NHY2 528 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 A8MUI8 341 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 KIF2AO00139 706 aaPredicted RBP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 CDK2AP1O14519 115 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PRMT3O60678 531 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 B4GALT2O60909 372 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 KERAO60938 352 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 CDC123O75794 336 aaPredicted RBP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 WDPCPO95876 746 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 C2P06681 752 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 RNH1P13489 461 aaKnown RBP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 TFEBP19484 476 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 OR4D2P58180 307 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 BTN3A2P78410 334 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 MRPL49Q13405 166 aaKnown RBP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 DOC2AQ14183 400 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 SLMAPQ14BN4 828 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 NR6A1Q15406 480 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PDK4Q16654 411 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 FAM83EQ2M2I3 478 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ADPRMQ3LIE5 342 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 SFT2D3Q587I9 215 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 XKR6Q5GH73 641 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PAGE2BQ5JRK9 111 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 TOR1AIP1Q5JTV8 583 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 MROH9Q5TGP6 573 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 QSOX2Q6ZRP7 698 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 LRRC70Q7Z2Q7 622 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 AMER2Q8N7J2 671 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 GRHL3Q8TE85 626 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 FAR1Q8WVX9 515 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 GAL3ST3Q96A11 431 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 NXNL1Q96CM4 212 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 MS4A6EQ96DS6 147 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PTCD3Q96EY7 689 aaKnown RBP9.89□□□□□ -0.83
CCDC9-203ENST00000596938 FAR2Q96K12 515 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ZNF354BQ96LW1 612 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PTCHD1Q96NR3 888 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ATOH8Q96SQ7 321 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 ACSS3Q9H6R3 686 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 NINJ2Q9NZG7 142 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 NUDT4Q9NZJ9 180 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
CCDC9-203ENST00000596938 A0A088AWK7 358 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 IGKV3D-11A0A0A0MRZ8 115 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 OR5H15A6NDH6 313 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 ANKUB1A6NFN9 424 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 SYCE1LA8MT33 242 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 C4orf51C9J302 202 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 FAM227AF5H4B4 570 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 PSMD12O00232 456 aaPredicted RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 ERI3O43414 337 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CCNT2O60583 730 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 AGFG2O95081 481 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 KLHL2O95198 593 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 TBX6O95947 436 aaPredicted RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CTAGE8P0CG41 777 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 MTHFD2P13995 350 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 EPORP19235 508 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CD22P20273 847 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 ZNF10P21506 573 aaPredicted RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 HNRNPH1P31943 449 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 GMPRP36959 345 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 OLR1P78380 273 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 BTG2P78543 158 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 IRF8Q02556 426 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CHIT1Q13231 466 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 EFTUD2Q15029 972 aaKnown RBP eCLIP9.88□□□□□ -0.834e-9■■■■■ 34
CCDC9-203ENST00000596938 ACAP2Q15057 778 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 INAQ16352 499 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 HIST2H2ACQ16777 129 aaPredicted RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 FBXO48Q5FWF7 155 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms