RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 CD244Q9BZW8 370 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 AICDAQ9GZX7 198 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 NT5DC2Q9H857 520 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 SLAMF7Q9NQ25 335 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 LANCL2Q9NS86 450 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 C19orf25Q9UFG5 118 aaPredicted RBP14.25□□□□□ -0.13
TRIM28-205ENST00000595028 B3GNT3Q9Y2A9 372 aa14.25□□□□□ -0.13
TRIM28-205ENST00000595028 CCDC189A1A4V9 331 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 CCNT2O60583 730 aaKnown RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PRAMEF4O60810 478 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 H2AFYO75367 372 aaKnown RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 FHP07954 510 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 CELA2AP08217 269 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 INHBAP08476 426 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PRR35P0CG20 571 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 SMIM10L1P0DMW3 83 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 SOX11P35716 441 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 HNF4AP41235 474 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 MAGEA12P43365 314 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 RAB8AP61006 207 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 STXBP1P61764 594 aaKnown RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 FAM83EQ2M2I3 478 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PRR30Q53SZ7 412 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 XKR6Q5GH73 641 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 TOR1AIP1Q5JTV8 583 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PRAMEF9Q5VWM5 478 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 RIPOR1Q6ZS17 1223 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 Q6ZS92 163 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 TAOK1Q7L7X3 1001 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 ATCAYQ86WG3 371 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 EFCAB3Q8N7B9 438 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 RHEBL1Q8TAI7 183 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PPP4R1Q8TF05 950 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 GAL3ST3Q96A11 431 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 ISL2Q96A47 359 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 TBC1D20Q96BZ9 403 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 PTCD3Q96EY7 689 aaKnown RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 SMIM10Q96HG1 83 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 TUBB6Q9BUF5 446 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 EFCAB11Q9BUY7 163 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 KLHL31Q9H511 634 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 CLK4Q9HAZ1 481 aaKnown RBP14.24□□□□□ -0.13
TRIM28-205ENST00000595028 NFU1Q9UMS0 254 aa14.24□□□□□ -0.13
TRIM28-205ENST00000595028 OR2W5A6NFC9 320 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 SYCE1LA8MT33 242 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CHST10O43529 356 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CLEC3AO75596 197 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CDC123O75794 336 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-205ENST00000595028 KLHL2O95198 593 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 MTHFD2P13995 350 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CD22P20273 847 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 JAK1P23458 1154 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 TYK2P29597 1187 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 GLRBP48167 497 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 AGTR2P50052 363 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 SERPINB9P50453 376 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 AP2B1P63010 937 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 RHAGQ02094 409 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 MFAP5Q13361 173 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 DOC2AQ14183 400 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 E2F2Q14209 437 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 INPP5JQ15735 1006 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CRB2Q5IJ48 1285 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 PAGE2BQ5JRK9 111 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 ADNP2Q6IQ32 1131 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 ISLR2Q6UXK2 745 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 VN1R5Q7Z5H4 357 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CPEB2Q7Z5Q1 589 aaKnown RBP14.23□□□□□ -0.13
TRIM28-205ENST00000595028 ANKRD37Q7Z713 158 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 IFT20Q8IY31 132 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 IQCKQ8N0W5 287 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 BRIX1Q8TDN6 353 aaKnown RBP14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CCT6BQ92526 530 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 PSMF1Q92530 271 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 TSLPQ969D9 159 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 IMMP1LQ96LU5 166 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 GPR78Q96P69 363 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 ILKAPQ9H0C8 392 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-205ENST00000595028 OPTCQ9UBM4 332 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 CSAG2Q9Y5P2 127 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 IKBKGQ9Y6K9 419 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 POLQO75417 2590 aa14.23□□□□□ -0.13
TRIM28-205ENST00000595028 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-205ENST00000595028 IGHV3-20A0A0C4DH32 117 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 MAGEB17A8MXT2 336 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 K7EPI3 171 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 ERI3O43414 337 aaKnown RBP14.22□□□□□ -0.13
TRIM28-205ENST00000595028 DNAJB6O75190 326 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 SEC24DO94855 1032 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-205ENST00000595028 TBX6O95947 436 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-205ENST00000595028 ABHD2P08910 425 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 HNRNPH1P31943 449 aaKnown RBP14.22□□□□□ -0.13
TRIM28-205ENST00000595028 RIPPLY3P57055 190 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 IRF8Q02556 426 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 CHIT1Q13231 466 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 LAPTM5Q13571 262 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 ABRAXAS2Q15018 415 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
TRIM28-205ENST00000595028 ACAP2Q15057 778 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms