RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 MAPKAPK3Q16644 382 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 CYP4X1Q8N118 509 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 GHDCQ8N2G8 530 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 ANKRD53Q8N9V6 530 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 SLCO2A1Q92959 643 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 TSNARE1Q96NA8 513 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 PHF12Q96QT6 1004 aa22.41■■□□□ 1.18
LSM4-202ENST00000593564 IGKV3D-11A0A0A0MRZ8 115 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 TCRBV16S1A1N1A0A5B0 115 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 CTAGE15A4D2H0 777 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 RNH1P13489 461 aaKnown RBP22.4■■□□□ 1.18
LSM4-202ENST00000593564 TRHRP34981 398 aaPredicted RBP22.4■■□□□ 1.18
LSM4-202ENST00000593564 BTG2P78543 158 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 PPP1R3AQ16821 1122 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 CTAGE6Q86UF2 777 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 ZNF227Q86WZ6 799 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 TRPV3Q8NET8 790 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 AIF1LQ9BQI0 150 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 TRIM8Q9BZR9 551 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 PRDM9Q9NQV7 894 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 IKZF3Q9UKT9 509 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 DYRK1BQ9Y463 629 aa22.4■■□□□ 1.18
LSM4-202ENST00000593564 ADGRG4Q8IZF6 3080 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 PSMD12O00232 456 aaPredicted RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 CLDN14O95500 239 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 SMIM10L1P0DMW3 83 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 ABOP16442 354 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 ZNF24P17028 368 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 MAOAP21397 527 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 IVDP26440 423 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 RAB8AP61006 207 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 HYAL2Q12891 473 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 TRMT10BQ6PF06 316 aaKnown RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 NXPE4Q6UWF7 544 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 THOC6Q86W42 341 aaKnown RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 CHERPQ8IWX8 916 aaKnown RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 PDIK1LQ8N165 341 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 ARMC10Q8N2F6 343 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 SLC35F6Q8N357 371 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 NFAM1Q8NET5 270 aaPredicted RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 MTFMTQ96DP5 389 aaKnown RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 SMIM10Q96HG1 83 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 LURAP1Q96LR2 239 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 DDX47Q9H0S4 455 aaKnown RBP22.39■■□□□ 1.17
LSM4-202ENST00000593564 GPAMQ9HCL2 828 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 SNX12Q9UMY4 172 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 TACC2O95359 2948 aa22.39■■□□□ 1.17
LSM4-202ENST00000593564 SERPINA6P08185 405 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 HNF4AP41235 474 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 HLCSP50747 726 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 CDSNQ15517 529 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 RNFT1Q5M7Z0 435 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 STEAP4Q687X5 459 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 TMPRSS11BQ86T26 416 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 CPSF7Q8N684 471 aaKnown RBP22.38■■□□□ 1.17
LSM4-202ENST00000593564 ARMC2Q8NEN0 867 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 CFAP36Q96G28 342 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 CHMP2BQ9UQN3 213 aa22.38■■□□□ 1.17
LSM4-202ENST00000593564 FCHO1O14526 889 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 ZNF37AP17032 561 aaPredicted RBP22.37■■□□□ 1.17
LSM4-202ENST00000593564 POU3F2P20265 443 aaPredicted RBP22.37■■□□□ 1.17
LSM4-202ENST00000593564 ELK3P41970 407 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 ITGA8P53708 1063 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 HSF1Q00613 529 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 FRG1Q14331 258 aaKnown RBP22.37■■□□□ 1.17
LSM4-202ENST00000593564 MORF4L2Q15014 288 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 POGLUT1Q8NBL1 392 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 CREB3L4Q8TEY5 395 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 AGAP11Q8TF27 550 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 PHF10Q8WUB8 498 aaKnown RBP22.37■■□□□ 1.17
LSM4-202ENST00000593564 ANKRD7Q92527 254 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 TMEM125Q96AQ2 219 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 LRRC39Q96DD0 335 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 WDR83Q9BRX9 315 aaKnown RBP22.37■■□□□ 1.17
LSM4-202ENST00000593564 DEFB126Q9BYW3 111 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 KLHL31Q9H511 634 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 NECTIN3Q9NQS3 549 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 SLC22A14Q9Y267 594 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 KCNE2Q9Y6J6 123 aa22.37■■□□□ 1.17
LSM4-202ENST00000593564 C19orf84I3L1E1 186 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 CDKL1Q00532 357 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 RBBP5Q15291 538 aaKnown RBP22.36■■□□□ 1.17
LSM4-202ENST00000593564 HP1BP3Q5SSJ5 553 aaPredicted RBP22.36■■□□□ 1.17
LSM4-202ENST00000593564 DOLPP1Q86YN1 238 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 ZNF295-AS1Q8N0V1 137 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 CA13Q8N1Q1 262 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 PWWP2AQ96N64 755 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 RHBGQ9H310 441 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 ZFATQ9P243 1243 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 KLF13Q9Y2Y9 288 aaPredicted RBP22.36■■□□□ 1.17
LSM4-202ENST00000593564 MMACHCQ9Y4U1 282 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 ASB1Q9Y576 335 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 TEX264Q9Y6I9 313 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 CACNA1CQ13936 2221 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 CCDC168Q8NDH2 2452 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 GTF3C1Q12789 2109 aa22.36■■□□□ 1.17
LSM4-202ENST00000593564 POLQO75417 2590 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 C4orf51C9J302 202 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 E9PLN8 166 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 CDC7O00311 574 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms