RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CNBD1Q8NA66 436 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 ATAD1Q8NBU5 361 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 GRAPLQ8TC17 118 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 ZNF473Q8WTR7 871 aaKnown RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 TM9SF4Q92544 642 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 PRCCQ92733 491 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 MTERF3Q96E29 417 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 ABHD1Q96SE0 405 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 NAA11Q9BSU3 229 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 TUBB2BQ9BVA1 445 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 CCDC106Q9BWC9 280 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 SLC5A7Q9GZV3 580 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 SPATC1LQ9H0A9 340 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 KCNK15Q9H427 330 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 XKR8Q9H6D3 395 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 SLA2Q9H6Q3 261 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 ZBTB20Q9HC78 741 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 LARSQ9P2J5 1176 aaKnown RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 FETUBQ9UGM5 382 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 BARX2Q9UMQ3 279 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 CLEC4AQ9UMR7 237 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 RPH3AQ9Y2J0 694 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-216ENST00000593223 ASB3Q9Y575 518 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 CLCA3PQ9Y6N3 262 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 CACNA1BQ00975 2339 aa4.54□□□□□ -1.68
SMAD4-216ENST00000593223 KIF7Q2M1P5 1343 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 WDR19Q8NEZ3 1342 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 LOC100509620A0A075B734 347 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 URADA6NGE7 173 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 F8VZ95 297 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CXCL11O14625 94 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CASC3O15234 703 aaKnown RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CLIC2O15247 247 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SSX4O60224 188 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CIDEAO60543 219 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SPAG6O75602 509 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 LETM1O95202 739 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ABCB1P08183 1280 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 INHBAP08476 426 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 PAX1P15863 534 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 GALP22466 123 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 NPY4RP50391 375 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 STAT2P52630 851 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CASP9P55211 416 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 TUBB4BP68371 445 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ACY1Q03154 408 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CXCL9Q07325 125 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SPAG1Q07617 926 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 PRKAA1Q13131 559 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 MELKQ14680 651 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 PCLAFQ15004 111 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CFAP221Q4G0U5 840 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD20A4Q4UJ75 823 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD20A8PQ5CZ79 823 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD20A2Q5SQ80 823 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD20A1Q5TYW2 823 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANKRD20A3Q5VUR7 823 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 METTL11BQ5VVY1 283 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SLC35E4Q6ICL7 350 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SUSD1Q6UWL2 747 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ANO5Q75V66 913 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 LDB1Q86U70 411 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 LINC00469Q8N7U9 141 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 NIPA2Q8N8Q9 360 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 FAM133AQ8N9E0 248 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ZBTB8BQ8NAP8 495 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 KLHDC9Q8NEP7 349 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 OR10V1Q8NGI7 309 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 WDR20Q8TBZ3 569 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 TEKT4Q8WW24 435 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 NR4A3Q92570 626 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 DAZLQ92904 295 aaKnown RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 DHX58Q96C10 678 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SPACA9Q96E40 222 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 C19orf60Q96EN9 201 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 C11orf24Q96F05 449 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ATP6V1G3Q96LB4 118 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 GAL3ST4Q96RP7 486 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SLC22A12Q96S37 553 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 CDRT15Q96T59 188 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 PSD2Q9BQI7 771 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 RIBC2Q9H4K1 309 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 OLFML3Q9NRN5 406 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ECHDC1Q9NTX5 307 aa4.53□□□□□ -1.68
SMAD4-216ENST00000593223 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 SPIN1Q9Y657 262 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-216ENST00000593223 KMT2BQ9UMN6 2715 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 ATRXP46100 2492 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MAP3K19Q56UN5 1328 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 TTC41PQ6P2S7 1318 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 GOLGA6L7A0A1B0GV03 622 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 PRSS51A0A1B0GVH4 220 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 TRBC2A0A5B9 178 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 MED19A0JLT2 244 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-216ENST00000593223 ELOVL7A1L3X0 281 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 XKRY2A2RUG3 117 aa4.52□□□□□ -1.69
SMAD4-216ENST00000593223 A6NL46 340 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms