RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TMEM178AQ8NBL3 297 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 FAM98AQ8NCA5 519 aaKnown RBP16.83■□□□□ 0.28
CIRBP-243ENST00000593128 TRPV3Q8NET8 790 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 ITLN2Q8WWU7 325 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-243ENST00000593128 LRRC39Q96DD0 335 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 RUNDC3BQ96NL0 473 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 CTNNAL1Q9UBT7 734 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 TINAGQ9UJW2 476 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 KCNE2Q9Y6J6 123 aa16.83■□□□□ 0.28
CIRBP-243ENST00000593128 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 ZNHIT1O43257 154 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 PIAS1O75925 651 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 SEC31AO94979 1220 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 MLYCDO95822 493 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 SP1P08047 785 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 RNH1P13489 461 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 PRF1P14222 555 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 TPP2P29144 1249 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 SLC12A2P55011 1212 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 TAS2R39P59534 338 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 BTN3A2P78410 334 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 MRPS25P82663 173 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 TSNQ15631 228 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 C3AR1Q16581 482 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 PPP1R3AQ16821 1122 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 ZC3HC1Q86WB0 502 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 ARMC2Q8NEN0 867 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 PDLIM5Q96HC4 596 aaKnown RBP16.82■□□□□ 0.28
CIRBP-243ENST00000593128 FAR2Q96K12 515 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 SARGQ9BW04 601 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
CIRBP-243ENST00000593128 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
CIRBP-243ENST00000593128 TNFRSF8P28908 595 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 GDF5P43026 501 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 PAFAH1B1P43034 410 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.81■□□□□ 0.28
CIRBP-243ENST00000593128 ZNF468Q5VIY5 522 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SLC25A25Q6KCM7 469 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 MTFR2Q6P444 385 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 QSOX2Q6ZRP7 698 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 CREG2Q8IUH2 290 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 MCEMP1Q8IX19 187 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.81■□□□□ 0.284e-6■■□□□ 12.7
CIRBP-243ENST00000593128 ZBED8Q8IZ13 594 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 CA13Q8N1Q1 262 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 THAP3Q8WTV1 239 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-243ENST00000593128 ANKRD49Q8WVL7 239 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SCMH1Q96GD3 660 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 GPR137Q96N19 417 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SLC6A16Q9GZN6 736 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 NECTIN3Q9NQS3 549 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 PRDM9Q9NQV7 894 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 OARD1Q9Y530 152 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SAR1BQ9Y6B6 198 aa16.81■□□□□ 0.28
CIRBP-243ENST00000593128 SAGE2PA6NJ88 616 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 C4orf51C9J302 202 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 SLC25A12O75746 678 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 ABOP16442 354 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 HTR1EP28566 365 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 HSF1Q00613 529 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 ART3Q13508 389 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 SLBPQ14493 270 aaKnown RBP eCLIP16.8■□□□□ 0.28
CIRBP-243ENST00000593128 FBXO48Q5FWF7 155 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 TICAM1Q8IUC6 712 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 CEP97Q8IW35 865 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 ZNF808Q8N4W9 903 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-243ENST00000593128 ELP5Q8TE02 316 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 SREK1Q8WXA9 508 aaKnown RBP16.8■□□□□ 0.28
CIRBP-243ENST00000593128 FRMD6Q96NE9 622 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 KRT12Q99456 494 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 NAPGQ99747 312 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-243ENST00000593128 DEFB126Q9BYW3 111 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 RUBCNLQ9H714 662 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 PNO1Q9NRX1 252 aaKnown RBP16.8■□□□□ 0.28
CIRBP-243ENST00000593128 FBXW2Q9UKT8 454 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 PCDHGB6Q9Y5F9 930 aa16.8■□□□□ 0.28
CIRBP-243ENST00000593128 TRBV11-1A0A0K0K1C0 115 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 FCHO1O14526 889 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 CLGNO14967 610 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 NEURL1O76050 574 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 MYO1DO94832 1006 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 C1GALT1C1LP0DN25 315 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 GNAZP19086 355 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 RPL21P46778 160 aaKnown RBP16.79■□□□□ 0.28
CIRBP-243ENST00000593128 CYB561P49447 251 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 HNMTP50135 292 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 STXBP1P61764 594 aaKnown RBP16.79■□□□□ 0.28
CIRBP-243ENST00000593128 RPTNQ6XPR3 784 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 ADAMTSL2Q86TH1 951 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 CPSF7Q8N684 471 aaKnown RBP16.79■□□□□ 0.28
CIRBP-243ENST00000593128 SNX31Q8N9S9 440 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 CREB3L4Q8TEY5 395 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 EXT2Q93063 718 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 TMEM125Q96AQ2 219 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 DPH5Q9H2P9 285 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms