RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TRPS1Q9UHF7 1281 aa9.43□□□□□ -0.9
TPM4-216ENST00000592822 GPN3Q9UHW5 284 aaPredicted RBP9.43□□□□□ -0.9
TPM4-216ENST00000592822 ADGRE2Q9UHX3 823 aa9.43□□□□□ -0.9
TPM4-216ENST00000592822 FARSAQ9Y285 508 aaKnown RBP9.43□□□□□ -0.9
TPM4-216ENST00000592822 STK38LQ9Y2H1 464 aa9.43□□□□□ -0.9
TPM4-216ENST00000592822 NAALAD2Q9Y3Q0 740 aa9.43□□□□□ -0.9
TPM4-216ENST00000592822 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 LOC400499M0QZD8 3231 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 IGLV3-12A0A075B6K2 115 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 A0A0G2JN53 185 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 WDR91A4D1P6 747 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 URADA6NGE7 173 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ZNF860A6NHJ4 632 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 VSTM2BA6NLU5 285 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 MAGEB17A8MXT2 336 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 H0YIG0 161 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FOXE1O00358 373 aaPredicted RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 MANBAO00462 879 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 BIRC5O15392 142 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ERI3O43414 337 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 SH3BGRLO75368 114 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 RDH16O75452 317 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 KLF7O75840 302 aaPredicted RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 ESRRBO95718 433 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 TGFB1P01137 390 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ALBP02768 609 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 PIM1P11309 404 aaPredicted RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 PTPN4P29074 926 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 SLC18A1P54219 525 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FOXA1P55317 472 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 RPS13P62277 151 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 ASPHQ12797 758 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 NKG7Q16617 165 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 SGO1Q5FBB7 561 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 TCHHL1Q5QJ38 904 aaPredicted RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 BROXQ5VW32 411 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 KHDRBS2Q5VWX1 349 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 CES4AQ5XG92 561 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FRG2Q64ET8 278 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 TTC19Q6DKK2 380 aaPredicted RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 CCDC81Q6ZN84 652 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ZCCHC23Q6ZST2 131 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 NUDCD3Q8IVD9 361 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 CDYL2Q8N8U2 506 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 ANKRD42Q8N9B4 389 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 OR2L5Q8NG80 312 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 OR5T3Q8NGG3 340 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 CMTM7Q96FZ5 175 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 QRFPRQ96P65 431 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FRG2BQ96QU4 278 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 KCNA7Q96RP8 456 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 C17orf62Q9BQA9 187 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 EFHD1Q9BUP0 239 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 SLC29A3Q9BZD2 475 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FAM117AQ9C073 453 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 REXO4Q9GZR2 422 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 SLC26A1Q9H2B4 701 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 MID1IP1Q9NPA3 183 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 PRDM7Q9NQW5 492 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
TPM4-216ENST00000592822 PSD3Q9NYI0 1048 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 HCN3Q9P1Z3 774 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 TRPC4Q9UBN4 977 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 TCFL5Q9UL49 500 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 MAP4K5Q9Y4K4 846 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 LAMA5O15230 3695 aa9.42□□□□□ -0.9
TPM4-216ENST00000592822 SAP18O00422 153 aaKnown RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 NKX2-8O15522 239 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 NPHS1O60500 1241 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 CREG1O75629 220 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 ETHE1O95571 254 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 PDYNP01213 254 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 ENO1P06733 434 aaKnown RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 CHRNGP07510 517 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 PTX3P26022 381 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 ARRB2P32121 409 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 HPDP32754 393 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 HTR6P50406 440 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 PLA2G16P53816 162 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 UCNP55089 124 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 TMPRSS3P57727 454 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 OLR1P78380 273 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 BTN3A2P78410 334 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 PHEXP78562 749 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 IFT88Q13099 833 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 IL10RAQ13651 578 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 TMEM35AQ53FP2 167 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 VWA2Q5GFL6 755 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 ARL13AQ5H913 290 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 C10orf62Q5T681 223 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 DEPDC1Q5TB30 811 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 NIPAL1Q6NVV3 410 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 C19orf48Q6RUI8 117 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms