RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 COPG2Q9UBF2 871 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 PTBP2Q9UKA9 531 aaKnown RBP13.06□□□□□ -0.32
APOC1-208ENST00000592535 ASB1Q9Y576 335 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 ZGRF1Q86YA3 2104 aa13.06□□□□□ -0.32
APOC1-208ENST00000592535 A0A0G2JN53 185 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 A8MUI8 341 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 CLGNO14967 610 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 CCNT2O60583 730 aaKnown RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 STK16O75716 305 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 WDPCPO95876 746 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 S100BP04271 92 aaPredicted RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 RNF224P0DH78 156 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 EPORP19235 508 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 TFEBP19484 476 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 JAK1P23458 1154 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 CRABP2P29373 138 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 HNRNPH1P31943 449 aaKnown RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 TNFSF10P50591 281 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 OR4D2P58180 307 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 BTG2P78543 158 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 ZNF33BQ06732 778 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 BMPR2Q13873 1038 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 PDK4Q16654 411 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 ABHD17BQ5VST6 288 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 FCRLBQ6BAA4 426 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 ADNP2Q6IQ32 1131 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 TBC1D1Q86TI0 1168 aaPredicted RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 ISCA2Q86U28 154 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 KRT78Q8N1N4 520 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 CA13Q8N1Q1 262 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 MMGT1Q8N4V1 131 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 STAG3L4Q8TBR4 150 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 CCT6BQ92526 530 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 HAS2Q92819 552 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 GAL3ST3Q96A11 431 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 ATOH8Q96SQ7 321 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 LPAR4Q99677 370 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 RHBGQ9H310 441 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 NT5DC2Q9H857 520 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 KCNK13Q9HB14 408 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 IGSF5Q9NSI5 407 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 NINJ2Q9NZG7 142 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 DMGDHQ9UI17 866 aaKnown RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 SVILO95425 2214 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
APOC1-208ENST00000592535 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
APOC1-208ENST00000592535 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 HMX2A2RU54 273 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 SUPT3HB4E1H0 165 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 FAM227AF5H4B4 570 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 E2F3O00716 465 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 SUPT3HO75486 399 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 TBX6O95947 436 aaPredicted RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 LTA4HP09960 611 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 CD22P20273 847 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 STXBP1P61764 594 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 BTN3A2P78410 334 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 IRF9Q00978 393 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 ACTN3Q08043 901 aaPredicted RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 DOC2AQ14183 400 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 UAP1Q16222 522 aaPredicted RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 EXT1Q16394 746 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 H3F3CQ6NXT2 135 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 RPUSD3Q6P087 351 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 QSOX2Q6ZRP7 698 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 VN1R5Q7Z5H4 357 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 TTLQ8NG68 377 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 M1APQ8TC57 530 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 KCTD4Q8WVF5 259 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 FAR1Q8WVX9 515 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 NXNL1Q96CM4 212 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 WDR34Q96EX3 536 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 PTCHD1Q96NR3 888 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 PSMG3-AS1Q96PY0 264 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 CD244Q9BZW8 370 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 RNF32Q9H0A6 362 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
APOC1-208ENST00000592535 EHD1Q9H4M9 534 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 CLK4Q9HAZ1 481 aaKnown RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 NMRAL1Q9HBL8 299 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 MMP25Q9NPA2 562 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 STMN3Q9NZ72 180 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 NUDT4Q9NZJ9 180 aa13.04□□□□□ -0.32
APOC1-208ENST00000592535 ZNF490Q9ULM2 529 aaPredicted RBP13.04□□□□□ -0.32
APOC1-208ENST00000592535 ICE1Q9Y2F5 2266 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 LRIT2A6NDA9 550 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 OR5H15A6NDH6 313 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 UBXN8O00124 270 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 PSMD12O00232 456 aaPredicted RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 ERI3O43414 337 aaKnown RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 PRMT3O60678 531 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 KERAO60938 352 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms