RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 A8MUI8 341 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 K7EPI3 171 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PSMD12O00232 456 aaPredicted RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 PRAMEF4O60810 478 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 VPS4BO75351 444 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 KRT38O76015 456 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 ALDOAP04075 364 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 FHP07954 510 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 CELA2AP08217 269 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PRR35P0CG20 571 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 SMIM10L1P0DMW3 83 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 JAK1P23458 1154 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 EFNA3P52797 238 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PCOLCEQ15113 449 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PFKFB4Q16877 469 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 LGSNQ5TDP6 509 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PRAMEF9Q5VWM5 478 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 ANKRD37Q7Z713 158 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 CISD2Q8N5K1 135 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 SIRT6Q8N6T7 355 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 TEX9Q8N6V9 391 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 AMER2Q8N7J2 671 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 Q8NA96 180 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 BRIX1Q8TDN6 353 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 MIB2Q96AX9 1013 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 SMIM10Q96HG1 83 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 SCYL1Q96KG9 808 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 CNDP1Q96KN2 507 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 IMMP1LQ96LU5 166 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PTCHD1Q96NR3 888 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 OR1F2PQ96R84 312 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PAFAH2Q99487 392 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 EFCAB11Q9BUY7 163 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 PITHD1Q9GZP4 211 aaPredicted RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 PLA2G3Q9NZ20 509 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 CPSF2Q9P2I0 782 aaKnown RBP11.39□□□□□ -0.59
TPM4-212ENST00000590180 VPS4AQ9UN37 437 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 ASB1Q9Y576 335 aa11.39□□□□□ -0.59
TPM4-212ENST00000590180 EXOC1LA0A1B0GW35 172 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 FAM227AF5H4B4 570 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 ERI3O43414 337 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 PRMT3O60678 531 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 CLEC3AO75596 197 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 SORBS2O94875 1100 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 CYC1P08574 325 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 PCNAP12004 261 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 RNH1P13489 461 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 MTHFD2P13995 350 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 EPB42P16452 691 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 GSTM2P28161 218 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 HPDP32754 393 aaPredicted RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 PLA2G16P53816 162 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 OR4D2P58180 307 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 AP2B1P63010 937 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 ARG2P78540 354 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 BTG2P78543 158 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 RUNX2Q13950 521 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 ABRAXAS2Q15018 415 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 TBCCQ15814 346 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 BTBD16Q32M84 506 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 SFT2D3Q587I9 215 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 CRB2Q5IJ48 1285 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 RIPOR1Q6ZS17 1223 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 Q6ZS92 163 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 TRMT10CQ7L0Y3 403 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 IQCKQ8N0W5 287 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 CA13Q8N1Q1 262 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 PLD6Q8N2A8 252 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 CATSPER1Q8NEC5 780 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 PSMF1Q92530 271 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 TSLPQ969D9 159 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 GAL3ST3Q96A11 431 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 MS4A6EQ96DS6 147 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 WDR34Q96EX3 536 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 SEC16BQ96JE7 1060 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 GPR78Q96P69 363 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 F2RL3Q96RI0 385 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 WDR77Q9BQA1 342 aaPredicted RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 REXO4Q9GZR2 422 aaKnown RBP11.38□□□□□ -0.59
TPM4-212ENST00000590180 AICDAQ9GZX7 198 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 LANCL2Q9NS86 450 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 ZNF358Q9NW07 568 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 STMN3Q9NZ72 180 aa11.38□□□□□ -0.59
TPM4-212ENST00000590180 A0A088AWK7 358 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 A0A1W2PQ72 361 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 CCDC189A1A4V9 331 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 DYTNA2CJ06 578 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 MAGEB17A8MXT2 336 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 TRIM49D1C9J1S8 452 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 B3GALT2O43825 422 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 SH3BGRLO75368 114 aa11.37□□□□□ -0.59
TPM4-212ENST00000590180 SNRPAP09012 282 aaKnown RBP11.37□□□□□ -0.59
TPM4-212ENST00000590180 RBP1P09455 135 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms