RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HK2P52789 917 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 BTN3A2P78410 334 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ABHD18Q0P651 414 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 COL9A2Q14055 689 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 PDCD2Q16342 344 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 AP5B1Q2VPB7 878 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 SPDYAQ5MJ70 313 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ABHD17CQ6PCB6 329 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 C6orf15Q6UXA7 325 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 FAM47EQ6ZV65 393 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ERMP1Q7Z2K6 904 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 TRIM46Q7Z4K8 759 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ARHGEF39Q8N4T4 335 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 MMABQ96EY8 250 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 ZNF578Q96N58 590 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 C17orf62Q9BQA9 187 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 TBCDQ9BTW9 1192 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ACPTQ9BZG2 426 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 ROGDIQ9GZN7 287 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 VTI1BQ9UEU0 232 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 MRPS2Q9Y399 296 aaKnown RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 NAALAD2Q9Y3Q0 740 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 A0A0G2JN53 185 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 H0YIG0 161 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 MEN1O00255 615 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 FOXS1O43638 330 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 KLHL18O94889 574 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 MED26O95402 600 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 ETHE1O95571 254 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 LINC00032P0C843 101 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 SMIM10L1P0DMW3 83 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 RORAP35398 523 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 TSFMP43897 325 aaKnown RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 ARFIP1P53367 373 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 SHC2P98077 582 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 HMGCS1Q01581 520 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 DEFB134Q4QY38 66 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 ARHGAP40Q5TG30 622 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 OR4C11Q6IEV9 310 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 PAGE2Q7Z2X7 111 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 DSELQ8IZU8 1212 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 ESX1Q8N693 406 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 METTL27Q8N6F8 245 aaPredicted RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 SLC38A9Q8NBW4 561 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 OR9A4Q8NGU2 314 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 PIWIL2Q8TC59 973 aaKnown RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 MR1Q95460 341 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 SMIM10Q96HG1 83 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 GBP5Q96PP8 586 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 DPH2Q9BQC3 489 aaPredicted RBP12.93□□□□□ -0.34
VMP1-210ENST00000589823 AICDAQ9GZX7 198 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 TUBB1Q9H4B7 451 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 ZNF304Q9HCX3 659 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 RIC8BQ9NVN3 520 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 PTGDR2Q9Y5Y4 395 aa12.93□□□□□ -0.34
VMP1-210ENST00000589823 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 C4orf51C9J302 202 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 SGK494L7N484 410 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 PLPP1O14494 284 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 HDAC3O15379 428 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 B3GALT2O43825 422 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 GALR3O60755 368 aaPredicted RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 RSL1D1O76021 490 aaKnown RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 VIMP08670 466 aaKnown RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 MTTPP55157 894 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 BTKQ06187 659 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 ACSM2AQ08AH3 577 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 MAP7Q14244 749 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 NR6A1Q15406 480 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 NKAIN1Q4KMZ8 207 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 SPIN4Q56A73 249 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 ACSM2BQ68CK6 577 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 PRSS41Q7RTY9 318 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 UBE3DQ7Z6J8 389 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 ZFAND4Q86XD8 727 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 COL26A1Q96A83 441 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 QRFPRQ96P65 431 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 SERINC2Q96SA4 455 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 MRPL1Q9BYD6 325 aaKnown RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 SPRY4Q9C004 299 aa12.92□□□□□ -0.34
VMP1-210ENST00000589823 CLK4Q9HAZ1 481 aaKnown RBP12.92□□□□□ -0.34
VMP1-210ENST00000589823 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms