RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ABHD17CQ6PCB6 329 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 IGF2-ASQ6U949 168 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 Q6ZSR9 355 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 ZFAND4Q86XD8 727 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 FAM9CQ8IZT9 166 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 ZCCHC7Q8N3Z6 543 aaKnown RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 ARHGEF39Q8N4T4 335 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 KCT2Q8NC54 265 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 CEP70Q8NHQ1 597 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SMIM10Q96HG1 83 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 LRFN5Q96NI6 719 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 F2RL3Q96RI0 385 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 CCDC28BQ9BUN5 200 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SPRTNQ9H040 489 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 ACTR5Q9H9F9 607 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 POLR1BQ9H9Y6 1135 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 PISDQ9UG56 409 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 SATB2Q9UPW6 733 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 CCL27Q9Y4X3 112 aa16.13■□□□□ 0.17
SCAMP4-211ENST00000588907 A0A1B0GX78 115 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 PLPP1O14494 284 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 ZNF749O43361 778 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 ETHE1O95571 254 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 ZNF888P0CJ79 500 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 PIM1P11309 404 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 LBPP18428 481 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 CD82P27701 267 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 MTTPP55157 894 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 CLDN6P56747 220 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 TBL3Q12788 808 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 C3orf38Q5JPI3 329 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 OR4C11Q6IEV9 310 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 OGFOD2Q6N063 350 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 ZCCHC10Q8TBK6 192 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 ADAMTS18Q8TE60 1221 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 CHTF18Q8WVB6 975 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 C10orf90Q96M02 699 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 SERINC2Q96SA4 455 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 C17orf62Q9BQA9 187 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 NPLQ9BXD5 320 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 NRSN2Q9GZP1 204 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 DDX31Q9H8H2 851 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 TCF7L2Q9NQB0 619 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 TRIM33Q9UPN9 1127 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 PTGDR2Q9Y5Y4 395 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 PTPRBP23467 1997 aa16.12■□□□□ 0.17
SCAMP4-211ENST00000588907 A0A0G2JND7 137 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SDHDO14521 159 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 B3GALT2O43825 422 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 GALR3O60755 368 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 GUCY1B2O75343 617 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SEC22BO75396 215 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 FAM107AO95990 144 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 JUNP05412 331 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 PRR35P0CG20 571 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 ITIH1P19827 911 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 DRD4P21917 467 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 HIST1H1TP22492 207 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 ID4P47928 161 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 MAPK10P53779 464 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 PLA2G16P53816 162 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SEC24CP53992 1094 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 ERVK-8P63133 956 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 EMX2Q04743 252 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 PWWP2BQ6NUJ5 590 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 LARP4Q71RC2 724 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 MAVSQ7Z434 540 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 COMMD6Q7Z4G1 85 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SPATA21Q7Z572 469 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SPATA19Q7Z5L4 167 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 RNF175Q8N4F7 328 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 C1orf52Q8N6N3 182 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 FNDC5Q8NAU1 212 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 OR2T11Q8NH01 316 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 C3orf30Q96M34 536 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 MRPL1Q9BYD6 325 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 KLHL31Q9H511 634 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 AKTIPQ9H8T0 292 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 STARD5Q9NSY2 213 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 LYARQ9NX58 379 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 MS4A12Q9NXJ0 267 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 ASIC5Q9NY37 505 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 NOP53Q9NZM5 478 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 EIF3LQ9Y262 564 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 PCDHGA7Q9Y5G6 932 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 SPACA6W5XKT8 324 aa16.11■□□□□ 0.17
SCAMP4-211ENST00000588907 ATP6AP2A0A1C7CYW4 349 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 HYAL3O43820 417 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 ATP6AP2O75787 350 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 KLHL18O94889 574 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 STATHP02808 62 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 AGXTP21549 392 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 EPHA3P29320 983 aa16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 RBMS1P29558 406 aaKnown RBP16.1■□□□□ 0.17
SCAMP4-211ENST00000588907 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■■■□ 21.9
SCAMP4-211ENST00000588907 IDH3AP50213 366 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms