RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 MS4A6EQ96DS6 147 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 SMAD5Q99717 465 aaKnown RBP9.55□□□□□ -0.88
TPM4-207ENST00000588032 ROGDIQ9GZN7 287 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 VN1R1Q9GZP7 353 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 REXO4Q9GZR2 422 aaKnown RBP9.55□□□□□ -0.88
TPM4-207ENST00000588032 KLHL31Q9H511 634 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 IPPKQ9H8X2 491 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 ACTR8Q9H981 624 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 ZNF71Q9NQZ8 489 aaPredicted RBP9.55□□□□□ -0.88
TPM4-207ENST00000588032 PSD3Q9NYI0 1048 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 GPR83Q9NYM4 423 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 HCN3Q9P1Z3 774 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 C19orf25Q9UFG5 118 aaPredicted RBP9.55□□□□□ -0.88
TPM4-207ENST00000588032 TBK1Q9UHD2 729 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 TP53TG5Q9Y2B4 290 aa9.55□□□□□ -0.88
TPM4-207ENST00000588032 NSG1A0A0A6YYJ2 146 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 A6NL46 340 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 H0YIV9 168 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 PSMD12O00232 456 aaPredicted RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 FFAR3O14843 346 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 GPR42O15529 346 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 ERI3O43414 337 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 SUV39H1O43463 412 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 B3GALT2O43825 422 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 DPM1O60762 260 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 CLDN9O95484 217 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 SHBGP04278 402 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 FHP07954 510 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 NUDT17P0C025 328 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 C8orf89P0DMQ9 161 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 RNH1P13489 461 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 KRT15P19012 456 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 EEF1DP29692 281 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 TSFMP43897 325 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 ARFIP1P53367 373 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 MTTPP55157 894 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 BTN3A2P78410 334 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 KLRB1Q12918 225 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 RCN2Q14257 317 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 MINDY4Q4G0A6 757 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 MFSD4BQ5TF39 518 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 VWA5B1Q5TIE3 1220 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 GOLGA7Q7Z5G4 137 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 VN1R5Q7Z5H4 357 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 SLC22A9Q8IVM8 553 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 TMEM151BQ8IW70 566 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 RIBC1Q8N443 379 aaPredicted RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 TEX19Q8NA77 164 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 OR7G3Q8NG95 312 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 ADAMTS18Q8TE60 1221 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 AENQ8WTP8 325 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 MZB1Q8WU39 189 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 TM9SF4Q92544 642 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 CAVIN3Q969G5 261 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 ATP6V1E2Q96A05 226 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 CMTM7Q96FZ5 175 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 PEX11GQ96HA9 241 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 KCNC2Q96PR1 638 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 SERINC2Q96SA4 455 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 CENPKQ9BS16 269 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 TBCDQ9BTW9 1192 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 TUBB6Q9BUF5 446 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 NTMT1Q9BV86 223 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 C1QTNF3Q9BXJ4 246 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 ROPN1BQ9BZX4 212 aaPredicted RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 ZNF700Q9H0M5 742 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 ROPN1Q9HAT0 212 aaPredicted RBP9.54□□□□□ -0.88
TPM4-207ENST00000588032 RIC8BQ9NVN3 520 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 TMEM216Q9P0N5 145 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 GRID1Q9ULK0 1009 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 FER1L5A0AVI2 2057 aa9.54□□□□□ -0.88
TPM4-207ENST00000588032 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 IGHV1-45A0A0A0MS14 117 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 SYNDIG1LA6NDD5 238 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ZNF860A6NHJ4 632 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 A8MT66 165 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 MAGEB17A8MXT2 336 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 GOLGA8RI6L899 631 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 FOXE1O00358 373 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 CLDN4O14493 209 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 GLRA3O75311 464 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 JRKO75564 520 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 SIX3O95343 332 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 OTCP00480 354 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 SBK3P0C264 359 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PCNAP12004 261 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 COX6A1P12074 109 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 ATP5F1P24539 256 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 ITGA3P26006 1051 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PTX3P26022 381 aaPredicted RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 HNRNPH1P31943 449 aaKnown RBP9.53□□□□□ -0.88
TPM4-207ENST00000588032 SLCO1A2P46721 670 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 CCNG1P51959 295 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 PLA2G16P53816 162 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 NAA20P61599 178 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 HERVK_113P63132 956 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 IFFO1Q0D2I5 559 aa9.53□□□□□ -0.88
TPM4-207ENST00000588032 NSDHLQ15738 373 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms