RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 HCFC1P51610 2035 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 URADA6NGE7 173 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 WDR47O94967 919 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SMIM10L1P0DMW3 83 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 MAOAP21397 527 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 HNMTP50135 292 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 TAS2R50P59544 299 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 BTG2P78543 158 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 RBBP5Q15291 538 aaKnown RBP17.61■□□□□ 0.41
TRIM47-205ENST00000587774 C18orf21Q32NC0 220 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-205ENST00000587774 TOR1AIP1Q5JTV8 583 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SPINK14Q6IE38 97 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRIM47-205ENST00000587774 LGI4Q8N135 537 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 CREB3L4Q8TEY5 395 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 CCDC120Q96HB5 630 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SMIM10Q96HG1 83 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 PTCHD1Q96NR3 888 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 UNKQ9C0B0 810 aaKnown RBP17.61■□□□□ 0.41
TRIM47-205ENST00000587774 GPAMQ9HCL2 828 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SMYD2Q9NRG4 433 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 COPG2Q9UBF2 871 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 CTNNAL1Q9UBT7 734 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SH3BGRL2Q9UJC5 107 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 SNX24Q9Y343 169 aa17.61■□□□□ 0.41
TRIM47-205ENST00000587774 NCKAP5O14513 1909 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 IGKV3D-11A0A0A0MRZ8 115 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 TCRBV16S1A1N1A0A5B0 115 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 SAGE2PA6NJ88 616 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 PRSS44E7EML9 344 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 PRMT3O60678 531 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 NEURL1O76050 574 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 SERPINA6P08185 405 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 RNH1P13489 461 aaKnown RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 EEF1DP29692 281 aaKnown RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 GDF5P43026 501 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 CA7P43166 264 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 SLC6A12P48065 614 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 MRPS25P82663 173 aaKnown RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 OC90Q02509 493 aaPredicted RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 TICAM1Q8IUC6 712 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 CYP4X1Q8N118 509 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 SLC34A3Q8N130 599 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 RHBDF1Q96CC6 855 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 FRMD6Q96NE9 622 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 KRT12Q99456 494 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 TSPAN10Q9H1Z9 355 aaPredicted RBP17.6■□□□□ 0.41
TRIM47-205ENST00000587774 RHBGQ9H310 441 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 CDCP1Q9H5V8 836 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 POPDC3Q9HBV1 291 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 NSMCE4AQ9NXX6 385 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 EXPH5Q8NEV8 1989 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 FREM3P0C091 2139 aa17.6■□□□□ 0.41
TRIM47-205ENST00000587774 OTOGQ6ZRI0 2925 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 ARHGAP21Q5T5U3 1957 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 ARHGAP10A1A4S6 786 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 ASPDHA6ND91 283 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 FAM227AF5H4B4 570 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 PSMD12O00232 456 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CCL21O00585 134 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 NDC80O14777 642 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 SLC19A2O60779 497 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 WISP3O95389 354 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CD46P15529 392 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 GNAZP19086 355 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 TPP2P29144 1249 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 PAFAH1B1P43034 410 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 RBPJQ06330 500 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 ZNF468Q5VIY5 522 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 GALNTL5Q7Z4T8 443 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 KLHDC8AQ8IYD2 350 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CA13Q8N1Q1 262 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 TMEM178AQ8NBL3 297 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 MARVELD3Q96A59 401 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CAB39LQ9H9S4 337 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CLK4Q9HAZ1 481 aaKnown RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 NECTIN3Q9NQS3 549 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 PRDM9Q9NQV7 894 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 LRFN1Q9P244 771 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 SUCOQ9UBS9 1254 aaKnown RBP17.59■□□□□ 0.41
TRIM47-205ENST00000587774 ENTPD4Q9Y227 616 aa17.59■□□□□ 0.41
TRIM47-205ENST00000587774 CELSR1Q9NYQ6 3014 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 A0A0G2JN53 185 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 NCF1BA6NI72 391 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 NCF1CA8MVU1 366 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 NCF1P14598 390 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 SSTR1P30872 391 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 HNRNPH1P31943 449 aaKnown RBP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 CBLBQ13191 982 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 SLBPQ14493 270 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 TGFBIQ15582 683 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 SLCO4C1Q6ZQN7 724 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 RPS19BP1Q86WX3 136 aaKnown RBP17.58■□□□□ 0.4
TRIM47-205ENST00000587774 GAL3ST3Q96A11 431 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 GPR137Q96N19 417 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 TMEM79Q9BSE2 394 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 DERL2Q9GZP9 239 aa17.58■□□□□ 0.4
TRIM47-205ENST00000587774 PYCARDQ9ULZ3 195 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms