RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CD1EP15812 388 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 DNAJA1P31689 397 aaKnown RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 GPR143P51810 404 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 ART1P52961 327 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 CDKN2DP55273 166 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 NUP107P57740 925 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 PWP1Q13610 501 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 THOC5Q13769 683 aaKnown RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 CATSPEREQ5SY80 951 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 C16orf47Q6ZP98 133 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 ANKRD53Q8N9V6 530 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 NT5CQ8TCD5 201 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SMIM10Q96HG1 83 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SEC16BQ96JE7 1060 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SERPINB12Q96P63 405 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 KLHL31Q9H511 634 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 PARVBQ9HBI1 364 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 COQ3Q9NZJ6 369 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 IKZF3Q9UKT9 509 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 ZKSCAN5Q9Y2L8 839 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 KLF13Q9Y2Y9 288 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 NAV3Q8IVL0 2385 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 SDR42E2A6NKP2 422 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 GOLGA8MH3BSY2 632 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 CDC40O60508 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
BRCA1-225ENST00000586385 PRMT3O60678 531 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 C8GP07360 202 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 HOXD4P09016 255 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-225ENST00000586385 MLNP12872 115 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 JAK1P23458 1154 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 PPP2R1BP30154 601 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 CHRNB4P30926 498 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 SCTRP47872 440 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 CCR8P51685 355 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 IST1P53990 364 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 DLX5P56178 289 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 RAB8AP61006 207 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 GPS1Q13098 491 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 RBM20Q5T481 1227 aaKnown RBP11.08□□□□□ -0.64
BRCA1-225ENST00000586385 UGT3A1Q6NUS8 523 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 PAQR3Q6TCH7 311 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 STRA8Q7Z7C7 330 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 ASB5Q8WWX0 329 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 SNF8Q96H20 258 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 DEFB126Q9BYW3 111 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 SLC6A16Q9GZN6 736 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 CCDC68Q9H2F9 335 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 C20orf96Q9NUD7 363 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-225ENST00000586385 SAMD15Q9P1V8 674 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 ZFATQ9P243 1243 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 PPIEQ9UNP9 301 aaKnown RBP11.08□□□□□ -0.64
BRCA1-225ENST00000586385 COMMD10Q9Y6G5 202 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 HCFC1P51610 2035 aa11.08□□□□□ -0.64
BRCA1-225ENST00000586385 ACANP16112 2415 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TRBV11-1A0A0K0K1C0 115 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 SLC16A5O15375 505 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 ITGA10O75578 1167 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 CCND1P24385 295 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 GRK3P35626 688 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 HNRNPFP52597 415 aaKnown RBP11.07□□□□□ -0.64
BRCA1-225ENST00000586385 REEP5Q00765 189 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 PMPCAQ10713 525 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 SP140Q13342 867 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 HSP90AA5PQ58FG0 334 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 XKR6Q5GH73 641 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM211Q6ICI0 200 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 KIAA0408Q6ZU52 694 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 SCUBE1Q8IWY4 988 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 EID3Q8N140 333 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 CA13Q8N1Q1 262 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TXLNBQ8N3L3 684 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 C2CD4AQ8NCU7 369 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM52Q8NDY8 209 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 MCUQ8NE86 351 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 CREB3L4Q8TEY5 395 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 RND1Q92730 232 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 NEIL2Q969S2 332 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 LINGO1Q96FE5 620 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 HAUS8Q9BT25 410 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 DEFB127Q9H1M4 99 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TP63Q9H3D4 680 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-225ENST00000586385 ZDHHC11Q9H8X9 412 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 PLAC1Q9HBJ0 212 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 TRMT6Q9UJA5 497 aaKnown RBP11.07□□□□□ -0.64
BRCA1-225ENST00000586385 ZFP69BQ9UJL9 534 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-225ENST00000586385 MAGEB16A2A368 324 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms