RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 FAM83EQ2M2I3 478 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 XKR6Q5GH73 641 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 PAGE2BQ5JRK9 111 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 PLAG1Q6DJT9 500 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 CTAGE6Q86UF2 777 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 CTAGE4Q8IX94 777 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 MMGT1Q8N4V1 131 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 PDPRQ8NCN5 879 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 M1APQ8TC57 530 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 CREB3L4Q8TEY5 395 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 PSMF1Q92530 271 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 ZNF354BQ96LW1 612 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 MAGEB10Q96LZ2 347 aaPredicted RBP11.66□□□□□ -0.54
SS18-225ENST00000585121 LPAR4Q99677 370 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 STMN3Q9NZ72 180 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 NUDT4Q9NZJ9 180 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 ABI3Q9P2A4 366 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 PTBP2Q9UKA9 531 aaKnown RBP11.66□□□□□ -0.54
SS18-225ENST00000585121 ACOT9Q9Y305 439 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 CSAG2Q9Y5P2 127 aa11.66□□□□□ -0.54
SS18-225ENST00000585121 A0A087X1B8 175 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CLEC18AA5D8T8 446 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PRMT3O60678 531 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 B4GALT2O60909 372 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CELA2AP08217 269 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 SLC35E2BP0CK96 405 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 EFNA3P52797 238 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 OLR1P78380 273 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 BTN3A2P78410 334 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 RHAGQ02094 409 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 ZNF33BQ06732 778 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 TGM3Q08188 693 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 MRPL49Q13405 166 aaKnown RBP11.65□□□□□ -0.54
SS18-225ENST00000585121 EIF2S3LQ2VIR3 472 aaKnown RBP11.65□□□□□ -0.54
SS18-225ENST00000585121 GLE1Q53GS7 698 aaKnown RBP11.65□□□□□ -0.54
SS18-225ENST00000585121 MROH9Q5TGP6 573 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 KLC3Q6P597 504 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PAPD4Q6PIY7 484 aaKnown RBP11.65□□□□□ -0.54
SS18-225ENST00000585121 FAM180AQ6UWF9 173 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CLEC18BQ6UXF7 455 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 LRRC70Q7Z2Q7 622 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CMC1Q7Z7K0 106 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.65□□□□□ -0.54
SS18-225ENST00000585121 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 MYRIPQ8NFW9 859 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 IFT81Q8WYA0 676 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 UBE2E3Q969T4 207 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.54
SS18-225ENST00000585121 PTCHD1Q96NR3 888 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 EFCAB11Q9BUY7 163 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 CD244Q9BZW8 370 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 RHBGQ9H310 441 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 KCNK13Q9HB14 408 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 PLA2G3Q9NZ20 509 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 IKBKGQ9Y6K9 419 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 DOCK10Q96BY6 2186 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 NUP210LQ5VU65 1888 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 ESPL1Q14674 2120 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
SS18-225ENST00000585121 ANKUB1A6NFN9 424 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 ERI3O43414 337 aaKnown RBP11.65□□□□□ -0.55
SS18-225ENST00000585121 KERAO60938 352 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 CLEC3AO75596 197 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.55
SS18-225ENST00000585121 B3GALT4O96024 378 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 SMIM10L1P0DMW3 83 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 TNFSF10P50591 281 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 TAS2R50P59544 299 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 IRF8Q02556 426 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 RCN2Q14257 317 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 EFTUD2Q15029 972 aaKnown RBP eCLIP11.65□□□□□ -0.555e-13■■■■■ 88.9
SS18-225ENST00000585121 FBXO48Q5FWF7 155 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 RPUSD3Q6P087 351 aaKnown RBP11.65□□□□□ -0.55
SS18-225ENST00000585121 QSOX2Q6ZRP7 698 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 TAOK1Q7L7X3 1001 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 ISCA2Q86U28 154 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 CYP4X1Q8N118 509 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 TSLPQ969D9 159 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 ESAMQ96AP7 390 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 SMIM10Q96HG1 83 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.55
SS18-225ENST00000585121 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.55
SS18-225ENST00000585121 RNF32Q9H0A6 362 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 MMP25Q9NPA2 562 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 COPG2Q9UBF2 871 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 OPTCQ9UBM4 332 aa11.65□□□□□ -0.55
SS18-225ENST00000585121 DOPEY2Q9Y3R5 2298 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 SCN3AQ9NY46 2000 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 LRIT2A6NDA9 550 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms