RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FAM91A1Q658Y4 838 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KCTD18Q6PI47 426 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM270Q6UE05 265 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 ANO5Q75V66 913 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 DSG4Q86SJ6 1040 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 LDB1Q86U70 411 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 LUZP1Q86V48 1076 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 DENND6AQ8IWF6 608 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC25A41Q8N5S1 370 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 IQCF1Q8N6M8 205 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 METTL13Q8N6R0 699 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 EMC1Q8N766 993 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CCNYQ8ND76 341 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CSNK2A3Q8NEV1 391 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF461Q8TAF7 563 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CEP76Q8TAP6 659 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 LINGO1Q96FE5 620 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SMARCD1Q96GM5 515 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CASD1Q96PB1 797 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 XPO6Q96QU8 1125 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 FCRL5Q96RD9 977 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SH3GL2Q99962 352 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 P2RY13Q9BPV8 354 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM213AQ9BRX8 229 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 EFHD1Q9BUP0 239 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TRAF4Q9BUZ4 470 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 PIGMQ9H3S5 423 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 PDZD7Q9H5P4 517 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 MINDY3Q9H8M7 445 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CNGB3Q9NQW8 809 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 PRMT8Q9NR22 394 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 HOMER3Q9NSC5 361 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 IL37Q9NZH6 218 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KLHL13Q9P2N7 655 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 NDRG3Q9UGV2 375 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SUN2Q9UH99 717 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 STAP1Q9ULZ2 295 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 ANK1P16157 1881 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 NUP210Q8TEM1 1887 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SCN5AQ14524 2016 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM208BQ5VWN6 2430 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TRAV19A0A0A6YYK7 116 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LINC01553A4QN01 128 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RGSL1A5PLK6 1076 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC169A6NNP5 214 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM110-MUSTN1A8MSY1 372 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGEB17A8MXT2 336 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 B4DGG1 531 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 GOLGA6L19H0YKK7 550 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RHOBTB1O94844 696 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PGK1P00558 417 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HEXBP07686 556 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 GZMAP12544 262 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ACHEP22303 614 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ARHGAP25P42331 645 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LUMP51884 338 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC7A9P82251 487 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MRPS34P82930 218 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 OVGP1Q12889 678 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RFTN1Q14699 578 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 INAQ16352 499 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CBWD6Q4V339 395 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 KLHL22Q53GT1 634 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SETMARQ53H47 684 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 AWAT1Q58HT5 328 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CBWD3Q5JTY5 395 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 EOGTQ5NDL2 527 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 METTL2BQ6P1Q9 378 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NEK5Q6P3R8 708 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FUT10Q6P4F1 479 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TRAT1Q6PIZ9 186 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TRILQ7L0X0 811 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MON1BQ7L1V2 547 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MDGA2Q7Z553 956 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF843Q8N446 348 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM109AQ8N4B1 249 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HDDC3Q8N4P3 179 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 UXS1Q8NBZ7 420 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FBXL13Q8NEE6 735 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 Q8NFD4 153 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 OR1J2Q8NGS2 313 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 EXD1Q8NHP7 514 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HEXDCQ8WVB3 486 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJB3Q8WWF6 145 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SPSB1Q96BD6 273 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 METTL2AQ96IZ6 378 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NSMCE2Q96MF7 247 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 OR1F2PQ96R84 312 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF347Q96SE7 839 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FRMD8Q9BZ67 464 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM234AQ9H0X4 552 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TLE6Q9H808 572 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 GPN1Q9HCN4 374 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 DMAP1Q9NPF5 467 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SIRT3Q9NTG7 399 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PRDM4Q9UKN5 801 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 EXO1Q9UQ84 846 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LAMP3Q9UQV4 416 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RUVBL2Q9Y230 463 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FBN3Q75N90 2809 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms