RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GPR65Q8IYL9 337 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 STARD8Q92502 1023 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 UBE2E3Q969T4 207 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 ISG20Q96AZ6 181 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 LHPPQ9H008 270 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 SPNS1Q9H2V7 528 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 REEP4Q9H6H4 257 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 RDH14Q9HBH5 336 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 DCAF13Q9NV06 445 aaKnown RBP10.85□□□□□ -0.67
TOP3A-217ENST00000584582 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 CEPT1Q9Y6K0 416 aa10.85□□□□□ -0.67
TOP3A-217ENST00000584582 FAM220BPB1ANY3 271 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ARNTLO00327 626 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 GMFGO60234 142 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 CNOT3O75175 753 aaKnown RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 RB1P06400 928 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 AK4P27144 223 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 MMP12P39900 470 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SLC5A12Q1EHB4 618 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 IFI44LQ53G44 452 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 CLEC12AQ5QGZ9 265 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 C9orf50Q5SZB4 431 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ATG9BQ674R7 924 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 DPP10Q8N608 796 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 OR8K5Q8NH50 307 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TSACCQ96A04 125 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 LMLNQ96KR4 655 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ABCG4Q9H172 646 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 MIR1-1HGQ9H1L0 117 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TOR4AQ9NXH8 423 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SLC23A2Q9UGH3 650 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 KNTC1P50748 2209 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 CACNB4O00305 520 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 RGS10O43665 173 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 NDUFS2O75306 463 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 NPPAP01160 153 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 IFNW1P05000 195 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 MPC1LP0DKB6 136 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 IFNA8P32881 189 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SLC19A1P41440 591 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 CDK9P50750 372 aaKnown RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 NCBP2P52298 156 aaKnown RBP eCLIP10.84□□□□□ -0.676e-7■□□□□ 10.1
TOP3A-217ENST00000584582 RPP38P78345 283 aaKnown RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TAP2Q03519 686 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 RUNX3Q13761 415 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SPIN4Q56A73 249 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TRIM46Q7Z4K8 759 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 MSRB3Q8IXL7 192 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TBC1D19Q8N5T2 526 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 OR5D16Q8NGK9 328 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ARSGQ96EG1 525 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 COPS4Q9BT78 406 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 RBCK1Q9BYM8 510 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SYNDIG1Q9H7V2 258 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 FAM120CQ9NX05 1096 aaKnown RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 CHCHD3Q9NX63 227 aaKnown RBP10.84□□□□□ -0.67
TOP3A-217ENST00000584582 TMED5Q9Y3A6 229 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 PCDHB11Q9Y5F2 797 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 IRAK3Q9Y616 596 aa10.84□□□□□ -0.67
TOP3A-217ENST00000584582 SCAMP2O15127 329 aaKnown RBP10.83□□□□□ -0.67
TOP3A-217ENST00000584582 ZW10O43264 779 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 FRS3O43559 492 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 KRT75O95678 551 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 CH25HO95992 272 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 ALPLP05186 524 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 DNAJA1P31689 397 aaKnown RBP10.83□□□□□ -0.67
TOP3A-217ENST00000584582 MLLT10P55197 1068 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.67
TOP3A-217ENST00000584582 EPS8Q12929 822 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 GAB1Q13480 694 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 CASP12Q6UXS9 341 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 FAM83HQ6ZRV2 1179 aaPredicted RBP10.83□□□□□ -0.67
TOP3A-217ENST00000584582 DCP2Q8IU60 420 aaKnown RBP10.83□□□□□ -0.67
TOP3A-217ENST00000584582 SLC34A3Q8N130 599 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 LEMD2Q8NC56 503 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 HERVK_113Q902F9 699 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 ART5Q96L15 291 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 FCRL4Q96PJ5 515 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 CCDC3Q9BQI4 270 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 DPEP2Q9H4A9 486 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 SELENONQ9NZV5 590 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 HSFX1Q9UBD0 423 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 STON1Q9Y6Q2 735 aa10.83□□□□□ -0.67
TOP3A-217ENST00000584582 ARHGEF15O94989 841 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 NTSP30990 170 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 TRPC1P48995 793 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 MXD1Q05195 221 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 SP140Q13342 867 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 C1orf61Q13536 156 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 HEPACAMQ14CZ8 416 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF77Q15935 545 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 DPY19L1Q2PZI1 675 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 HENMT1Q5T8I9 393 aaKnown RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ERICH5Q6P6B1 374 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms