RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 FRG2Q64ET8 278 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 TTC19Q6DKK2 380 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 CLEC6AQ6EIG7 209 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 VN1R5Q7Z5H4 357 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 VN1R4Q7Z5H5 301 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 OR4N4Q8N0Y3 316 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 TTLQ8NG68 377 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 MR1Q95460 341 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 TM4SF19Q96DZ7 209 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 SEC16BQ96JE7 1060 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 C7orf26Q96N11 449 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 FRG2BQ96QU4 278 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 SNX6Q9UNH7 406 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 FER1L5A0AVI2 2057 aa15.2■□□□□ 0.02
CSNK1D-223ENST00000584472 ANKDD1BA6NHY2 528 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF891A8MT65 544 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 KRT6AP02538 564 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 KRT6BP04259 564 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 PRB1P04280 392 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 RAB40ALP0C0E4 278 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TCN2P20062 427 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 AGXTP21549 392 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 KRT6CP48668 564 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 HTR6P50406 440 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 RPL14P50914 215 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 NEK2P51955 445 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 EMP3P54852 163 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 MC1RQ01726 317 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 IFT88Q13099 833 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 FAM214AQ32MH5 1076 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 UGT3A2Q3SY77 523 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 WASHC2DQ5SRD0 308 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF385CQ66K41 422 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ASPGQ86U10 573 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 KIRREL3Q8IZU9 778 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TTC29Q8NA56 475 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TRPV3Q8NET8 790 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 HUS1BQ8NHY5 278 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 CREB3L4Q8TEY5 395 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 STARD8Q92502 1023 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 RERGQ96A58 199 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 MTFMTQ96DP5 389 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 GBP5Q96PP8 586 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 CHST8Q9H2A9 424 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ELOVL6Q9H5J4 265 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 AKIRIN1Q9H9L7 192 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 PNPOQ9NVS9 261 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 IL17BQ9UHF5 180 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 ADGRE2Q9UHX3 823 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 FIS1Q9Y3D6 152 aa15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 TLN1Q9Y490 2541 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-223ENST00000584472 A0A1B0GX78 115 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 C9J4A7 227 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 MANBAO00462 879 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 TXNDC9O14530 226 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 P2RX6O15547 441 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 ULK1O75385 1050 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CLEC3AO75596 197 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 TBX6O95947 436 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 RECKO95980 971 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 PDYNP01213 254 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 F8A1P23610 371 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 SERPINB1P30740 379 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 PIK3CBP42338 1070 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 RPS15P62841 145 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CYP4F2P78329 520 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 DCDP81605 110 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF33BQ06732 778 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 DDX39BQ13838 428 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 PRTGQ2VWP7 1150 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 FAM198BQ6UWH4 519 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 FAM47EQ6ZV65 393 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF605Q86T29 641 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CRLF3Q8IUI8 442 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 HOMEZQ8IX15 550 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 RNF175Q8N4F7 328 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CSNK1A1LQ8N752 337 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CAMKVQ8NCB2 501 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 NT5CQ8TCD5 201 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 SLC13A3Q8WWT9 602 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 SELENOMQ8WWX9 145 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 MTERF1Q99551 399 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 NLNQ9BYT8 704 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 DMRT3Q9NQL9 472 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 FARSBQ9NSD9 589 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 CUTCQ9NTM9 273 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 DHCR7Q9UBM7 475 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 DNAJC15Q9Y5T4 150 aa15.18■□□□□ 0.02
CSNK1D-223ENST00000584472 SERTM1A2A2V5 107 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 HYKKA2RU49 373 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 MAGEB17A8MXT2 336 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms