RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ANKRD7Q92527 254 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 HAS2Q92819 552 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 SARGQ9BW04 601 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 TRIM31Q9BZY9 425 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 VN1R1Q9GZP7 353 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF395Q9H8N7 513 aaPredicted RBP10.49□□□□□ -0.73
CCDC47-206ENST00000584112 TEKT2Q9UIF3 430 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 SH2B3Q9UQQ2 575 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 SLC22A7Q9Y694 548 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 TRAV17A0A0B4J275 112 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 FAM95CA0A1B0GW59 222 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 TRBC2A0A5B9 178 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 E7ESA3 106 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 SGK494L7N484 410 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 NDUFS4O43181 175 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PROM1O43490 865 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 OR1F1O43749 312 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 LCMT2O60294 686 aaKnown RBP10.48□□□□□ -0.73
CCDC47-206ENST00000584112 GUCA1CO95843 209 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 MYBL2P10244 700 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF37AP17032 561 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-206ENST00000584112 RGS1Q08116 209 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PWP1Q13610 501 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 CSHL1Q14406 222 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 ABHD17BQ5VST6 288 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 SBSNQ6UWP8 590 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 NCCRP1Q6ZVX7 275 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PRSS41Q7RTY9 318 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 CPEB2Q7Z5Q1 589 aaKnown RBP10.48□□□□□ -0.73
CCDC47-206ENST00000584112 STRA8Q7Z7C7 330 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 ANKMY2Q8IV38 441 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 SIRT6Q8N6T7 355 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 BCORP1Q8N888 145 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 KCT2Q8NC54 265 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 FBXO36Q8NEA4 188 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 OR4K1Q8NGD4 311 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 OR1N1Q8NGS0 311 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 SUN3Q8TAQ9 357 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PSMF1Q92530 271 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PYCR2Q96C36 320 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 VPS39Q96JC1 886 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 PDLIM2Q96JY6 352 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 IMMP1LQ96LU5 166 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 ALPK1Q96QP1 1244 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 OR1F2PQ96R84 312 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 CYTH2Q99418 400 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 OLFM1Q99784 485 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
CCDC47-206ENST00000584112 RNF32Q9H0A6 362 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 HCN3Q9P1Z3 774 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 NAALAD2Q9Y3Q0 740 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 DYRK1BQ9Y463 629 aa10.48□□□□□ -0.73
CCDC47-206ENST00000584112 URADA6NGE7 173 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 RDH16O75452 317 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 ITGAMP11215 1152 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 SAT1P21673 171 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 AHRP35869 848 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 CA7P43166 264 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 RPL21P46778 160 aaKnown RBP10.47□□□□□ -0.73
CCDC47-206ENST00000584112 HNMTP50135 292 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 TNFSF10P50591 281 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 CDKL1Q00532 357 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 CBLBQ13191 982 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 EXT1Q16394 746 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 PLAG1Q6DJT9 500 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 MTFR2Q6P444 385 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 ABHD13Q7L211 337 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 ZC3HC1Q86WB0 502 aaKnown RBP10.47□□□□□ -0.73
CCDC47-206ENST00000584112 ZBED8Q8IZ13 594 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 NEIL2Q969S2 332 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 OR4K3Q96R72 315 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 KRT12Q99456 494 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 MACROD1Q9BQ69 325 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 AIF1LQ9BQI0 150 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC47-206ENST00000584112 RHOJQ9H4E5 214 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 PELI2Q9HAT8 420 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 POPDC3Q9HBV1 291 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 MOCS1Q9NZB8 636 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 PSAT1Q9Y617 370 aa10.47□□□□□ -0.73
CCDC47-206ENST00000584112 EML6Q6ZMW3 1958 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 MGAM2Q2M2H8 2515 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 TP73O15350 636 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 SEC24DO94855 1032 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 SERPIND1P05546 499 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CELA2AP08217 269 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ALOX12P18054 663 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 JAK1P23458 1154 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 TDGF1P3P51864 188 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 EFNA3P52797 238 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PGGT1BP53609 377 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 SLC12A2P55011 1212 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 TAS2R39P59534 338 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 SNRPNP63162 240 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms