RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 ARMC2Q8NEN0 867 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TRPV3Q8NET8 790 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ABHD11Q8NFV4 315 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NT5CQ8TCD5 201 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 THAP3Q8WTV1 239 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NEIL2Q969S2 332 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TMEM125Q96AQ2 219 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FBXL8Q96CD0 374 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AIF1LQ9BQI0 150 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SARGQ9BW04 601 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TSPAN10Q9H1Z9 355 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CDCP1Q9H5V8 836 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 LANCL2Q9NS86 450 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.14e-8■□□□□ 10.4
CDK5RAP3-229ENST00000583697 TINAGQ9UJW2 476 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SPTAN1Q13813 2472 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 DOPEY1Q5JWR5 2465 aa8.18□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SPTBN1Q01082 2364 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ASPDHA6ND91 283 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NPEPPSL1A6NEC2 478 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NPIPA5E9PKD4 350 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CDK2AP1O14519 115 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CHST10O43529 356 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PRMT3O60678 531 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 B4GALT2O60909 372 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SLC25A12O75746 678 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TSPAN12O95859 305 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SP1P08047 785 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RNH1P13489 461 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PRF1P14222 555 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ELAVL4P26378 380 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GABRB3P28472 473 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 HTR1EP28566 365 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AHRP35869 848 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CD96P40200 585 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 HNF4AP41235 474 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SCTRP47872 440 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CYB561P49447 251 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RAB8AP61006 207 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TIAL1Q01085 375 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PDIA2Q13087 525 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RBBP5Q15291 538 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 C3AR1Q16581 482 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MAPKAPK3Q16644 382 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KRTCAP3Q53RY4 240 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TOR1AIP1Q5JTV8 583 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TEDDM1Q5T9Z0 273 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SLC25A25Q6KCM7 469 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 XKRXQ6PP77 449 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 STRA8Q7Z7C7 330 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 THOC6Q86W42 341 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CCDC25Q86WR0 208 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 RPS19BP1Q86WX3 136 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GHDCQ8N2G8 530 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KIF2BQ8N4N8 673 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AFAP1L2Q8N4X5 818 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 EIF1ADQ8N9N8 165 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OR4K1Q8NGD4 311 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FBXO25Q8TCJ0 367 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ELP5Q8TE02 316 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 UTP15Q8TED0 518 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CCT6BQ92526 530 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 LRRC39Q96DD0 335 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PTCHD1Q96NR3 888 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OR4K3Q96R72 315 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NPAS2Q99743 824 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 OLFM1Q99784 485 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PARD6BQ9BYG5 372 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SPNS1Q9H2V7 528 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PELI2Q9HAT8 420 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GPAMQ9HCL2 828 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PRDM9Q9NQV7 894 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 GRHL1Q9NZI5 618 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NPIPA1Q9UND3 350 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 KCNE2Q9Y6J6 123 aa8.17□□□□□ -1.1
CDK5RAP3-229ENST00000583697 UNC79Q9P2D8 2635 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 A0A088AWK7 358 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 PRRG2O14669 202 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 TFECO14948 347 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 EIF3HO15372 352 aaKnown RBP eCLIP8.16□□□□□ -1.12e-7■■□□□ 11.6
CDK5RAP3-229ENST00000583697 NME2P1O60361 137 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MAN1A2O60476 641 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NEURL1O76050 574 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 WDR47O94967 919 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 CLDN14O95500 239 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 B3GALT4O96024 378 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 SNRPB2P08579 225 aaKnown RBP8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 AGAP20933 346 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 MAOAP21397 527 aa8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 ZNF10P21506 573 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-229ENST00000583697 NME2P22392 152 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms