RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CCDC167Q9P0B6 97 aa17.28■□□□□ 0.36
NDEL1-217ENST00000583683 PLCL2Q9UPR0 1127 aa17.28■□□□□ 0.36
NDEL1-217ENST00000583683 SPTBP11277 2137 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 SCN3AQ9NY46 2000 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 COL27A1Q8IZC6 1860 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 D6RAR5 112 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ZSCAN9O15535 394 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 KLHL18O94889 574 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 CBX6O95503 412 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ANXA4P09525 319 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ANKRD34CP0C6C1 535 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 TPP2P29144 1249 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ARFIP1P53367 373 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 SNRPNP63162 240 aaKnown RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 AGKQ53H12 422 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 WASHC2DQ5SRD0 308 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 OR4C11Q6IEV9 310 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 TRIM40Q6P9F5 258 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 FUNDC1Q8IVP5 155 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ZNF655Q8N720 491 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 GAL3ST3Q96A11 431 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ZNF285Q96NJ3 590 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 TSSK3Q96PN8 268 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 KCNC2Q96PR1 638 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 TEFMQ96QE5 360 aaKnown RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 DDX31Q9H8H2 851 aaKnown RBP17.27■□□□□ 0.36
NDEL1-217ENST00000583683 PRDM7Q9NQW5 492 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 STARD5Q9NSY2 213 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ZIM2Q9NZV7 527 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 MCM8Q9UJA3 840 aa17.27■□□□□ 0.36
NDEL1-217ENST00000583683 ZNF292O60281 2723 aa17.27■□□□□ 0.35
NDEL1-217ENST00000583683 A0A0G2JN53 185 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 GNG14A0A1W2PPG7 69 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 EEDO75530 441 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ARL4DP49703 201 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 RAB8AP61006 207 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ZNF793Q6ZN11 406 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 PAGE2Q7Z2X7 111 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 NUDT13Q86X67 352 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 SRFBP1Q8NEF9 429 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 CLHC1Q8NHS4 586 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 UTP15Q8TED0 518 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 TMEM74Q96NL1 305 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 PHOX2BQ99453 314 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ADAM29Q9UKF5 820 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 SLC22A3O75751 556 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ZNF888P0CJ79 500 aaPredicted RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 SMIM10L1P0DMW3 83 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 T-ENOLP0DO92 83 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 JAK1P23458 1154 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ZFP36L2P47974 494 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 CLDN8P56748 225 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 BNIP1Q12981 228 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 SPIDRQ14159 915 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 STPG1Q5TH74 334 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 TMEM214Q6NUQ4 689 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 SLITRK4Q8IW52 837 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ARHGEF39Q8N4T4 335 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 AMER3Q8N944 861 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 RCBTB1Q8NDN9 531 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.26■□□□□ 0.351e-12■■■■■ 31.6
NDEL1-217ENST00000583683 SMIM10Q96HG1 83 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 CCDC74BQ96LY2 380 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 CDC6Q99741 560 aa17.26■□□□□ 0.35
NDEL1-217ENST00000583683 TACO1Q9BSH4 297 aaKnown RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 ACTR5Q9H9F9 607 aaPredicted RBP17.26■□□□□ 0.35
NDEL1-217ENST00000583683 LOC100653049A0A140TA62 436 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 URADA6NGE7 173 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 C9JVG2 144 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 KRT34O76011 436 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 B3GALT4O96024 378 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 MSL3P1P0C860 447 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 FOLR1P15328 257 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 IL12AP29459 219 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 SSR2P43308 183 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 TSFMP43897 325 aaKnown RBP17.25■□□□□ 0.35
NDEL1-217ENST00000583683 MNAT1P51948 309 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 ZNF763Q0D2J5 394 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 SPRED3Q2MJR0 410 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 PRTGQ2VWP7 1150 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 CCNYL2Q5T2Q4 361 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 GK5Q6ZS86 529 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 CCDC121Q6ZUS5 278 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 FAM9CQ8IZT9 166 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 KRTCAP2Q8N6L1 136 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 POU5F2Q8N7G0 328 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 ZCCHC10Q8TBK6 192 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 NUDT8Q8WV74 236 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 TBCDQ9BTW9 1192 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 NLNQ9BYT8 704 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 TMEM45AQ9NWC5 275 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 MRPS2Q9Y399 296 aaKnown RBP17.25■□□□□ 0.35
NDEL1-217ENST00000583683 ZFHX2Q9C0A1 2572 aaPredicted RBP17.25■□□□□ 0.35
NDEL1-217ENST00000583683 PCNX2A6NKB5 2137 aa17.25■□□□□ 0.35
NDEL1-217ENST00000583683 A0A0A6YYD5 115 aa17.24■□□□□ 0.35
NDEL1-217ENST00000583683 H3BMH7 237 aa17.24■□□□□ 0.35
NDEL1-217ENST00000583683 TXNDC9O14530 226 aa17.24■□□□□ 0.35
NDEL1-217ENST00000583683 PCSK2P16519 638 aa17.24■□□□□ 0.35
NDEL1-217ENST00000583683 HIST1H1TP22492 207 aaPredicted RBP17.24■□□□□ 0.35
NDEL1-217ENST00000583683 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms