RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TBC1D10AQ9BXI6 508 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 COA1Q9GZY4 146 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 OR10A4Q9H209 315 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 MUC13Q9H3R2 512 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 FGFR1OP2Q9NVK5 253 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 PPP1R14DQ9NXH3 145 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 CYP39A1Q9NYL5 469 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NKIRAS1Q9NYS0 192 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NINJ2Q9NZG7 142 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 POLLQ9UGP5 575 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC24A2Q9UI40 661 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ACAD8Q9UKU7 415 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 A4GNTQ9UNA3 340 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 KLHL20Q9Y2M5 609 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 ASB3Q9Y575 518 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 SBF2Q86WG5 1849 aa3.74□□□□□ -1.81
SMCHD1-208ENST00000583344 NFASCO94856 1347 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MROH7Q68CQ1 1323 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ZCWPW2A0A1B0GU75 182 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SIGLEC16A6NMB1 481 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 AGAP14A8MT82 685 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 NR5A2O00482 541 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 LDLRAD4O15165 306 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SPINT2O43291 252 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SPOPO43791 374 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 TYROBPO43914 113 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ZWINTO95229 277 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GSTA2P09210 222 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CD48P09326 243 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 NR2F1P10589 423 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CYP11B1P15538 503 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ACADSP16219 412 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GNB3P16520 340 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ZNF10P21506 573 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GCAP28676 217 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GCH1P30793 250 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 HOXC13P31276 330 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 BSGP35613 385 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 PSMB10P40306 273 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ARL1P40616 181 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MAGEA4P43358 317 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SLCO1A2P46721 670 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 IFNAR2P48551 515 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MARCKSL1P49006 195 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 UFM1P61960 85 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GCNT1Q02742 428 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 COG2Q14746 738 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 PRICKLE4Q2TBC4 344 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 APOBEC3HQ6NTF7 200 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 IRGCQ6NXR0 463 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CDC42EP5Q6NZY7 148 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM179Q6ZVK1 233 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 RRM2BQ7LG56 351 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 LONP2Q86WA8 852 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MFN1Q8IWA4 741 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 LMNTD2Q8IXW0 634 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 RCOR2Q8IZ40 523 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MCOLN2Q8IZK6 566 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 DAW1Q8N136 415 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 XXYLT1Q8NBI6 393 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 EXD1Q8NHP7 514 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ZNF564Q8TBZ8 553 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 C10orf82Q8WW14 230 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM190Q8WZ59 177 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 RMDN2Q96LZ7 410 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 TTC25Q96NG3 672 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ASCL2Q99929 193 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 BTBD10Q9BSF8 475 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CCDC28BQ9BUN5 200 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 NUP85Q9BW27 656 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 IDI2Q9BXS1 227 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MRPL9Q9BYD2 267 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM117Q9H0C3 514 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 MMADHCQ9H3L0 296 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 DBNDD1Q9H9R9 158 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 HCN3Q9P1Z3 774 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 LARSQ9P2J5 1176 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 DNAJB4Q9UDY4 337 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 SARDHQ9UL12 918 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CHKBQ9Y259 395 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 CEPT1Q9Y6K0 416 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 ZHX2Q9Y6X8 837 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 QSER1Q2KHR3 1735 aa3.73□□□□□ -1.81
SMCHD1-208ENST00000583344 LRRD1A4D1F6 860 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 GAGE10A6NGK3 116 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 SMIM23A6NLE4 172 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 A8MUI8 341 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 A8MXQ7 604 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 TAF4O00268 1085 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 DNALI1O14645 258 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CLDN3O15551 220 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 PSTPIP1O43586 416 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 CCDC22O60826 627 aa3.72□□□□□ -1.81
SMCHD1-208ENST00000583344 UFL1O94874 794 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms