RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ERVK11-1P61568 191 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 CYCSP99999 105 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 NECTIN1Q15223 517 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 MAPK11Q15759 364 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 KIF6Q6ZMV9 814 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 C15orf52Q6ZUT6 534 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 SIAH3Q8IW03 269 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 C10orf53Q8N6V4 93 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 NUP37Q8NFH4 326 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 ATP8B4Q8TF62 1192 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 SEPT8Q92599 483 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 POM121L2Q96KW2 1035 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 LINC00479Q96M42 142 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 ACPTQ9BZG2 426 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC5A7Q9GZV3 580 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 UPF3AQ9H1J1 476 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 ZDHHC18Q9NUE0 388 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 DBF4Q9UBU7 674 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 LNPEPQ9UIQ6 1025 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 A0A087X0K7 114 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 hCG_38984A0A1B0GV85 526 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 M0R296 226 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 CALCAP01258 141 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 OAS2P29728 719 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 ARHGAP1Q07960 439 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 GRB14Q14449 540 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 ACKR1Q16570 336 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 MTHFSDQ2M296 383 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 FASTKD1Q53R41 847 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 ZNF789Q5FWF6 425 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 SPANXN4Q5MJ08 99 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 TCEAL6Q6IPX3 200 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 FRRS1Q6ZNA5 592 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 ZNF497Q6ZNH5 498 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 C11orf45Q8TAV5 145 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 BPIFA2Q96DR5 249 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 PCDHB18PQ96TA0 734 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 SYT11Q9BT88 431 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 MTHFD2LQ9H903 347 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 RNPEPL1Q9HAU8 725 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 THEGQ9P2T0 379 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 STX8Q9UNK0 236 aa4.74□□□□□ -1.65
SMARCE1-219ENST00000583294 C2orf92A0A1B0GVN3 265 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 A0A1W2PRV1 198 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 SIGLEC5O15389 551 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 CEACAM4O75871 244 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 GOSR1O95249 250 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 RPLP0P05388 317 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 KRT3P12035 628 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 C4BPBP20851 252 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 GIFP27352 417 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 GJB2P29033 226 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 HUNKP57058 714 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC34A1Q06495 639 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC39A12Q504Y0 691 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 AGAP6Q5VW22 663 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 PRAMEF8Q5VWM4 474 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 Q71RC1 249 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 ASPGQ86U10 573 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC22A15Q8IZD6 547 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 CHURC1Q8WUH1 139 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 SMPDL3AQ92484 453 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 FAM46BQ96A09 425 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 C18orf12Q96KH6 178 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 NSMCE3Q96MG7 304 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 IWS1Q96ST2 819 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 FGFBP2Q9BYJ0 223 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 TEX10Q9NXF1 929 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 TRPC4Q9UBN4 977 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 ASIC3Q9UHC3 531 aa4.73□□□□□ -1.65
SMARCE1-219ENST00000583294 RNF123Q5XPI4 1314 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 MEX3AA1L020 520 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 TLX2O43763 284 aaPredicted RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 EZRP15311 586 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 VCLP18206 1134 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 COPB2P35606 906 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 FEN1P39748 380 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 SERPINH1P50454 418 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 ADARP55265 1226 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 HILS1P60008 231 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 CNTN1Q12860 1018 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 CEACAM7Q14002 265 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 ODF2Q5BJF6 829 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 RFPL4BQ6ZWI9 263 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 LRRTM1Q86UE6 522 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 UNC45BQ8IWX7 931 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 DND1Q8IYX4 353 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 THEM5Q8N1Q8 247 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC43A2Q8N370 569 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 TMEM99Q8N816 258 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 ZNF713Q8N859 430 aaPredicted RBP4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 AQP11Q8NBQ7 271 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 OR13C5Q8NGS8 318 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 CD99L2Q8TCZ2 262 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC35C1Q96A29 364 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 ATXN7L3BQ96GX2 97 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 OVOL2Q9BRP0 275 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 UBAC1Q9BSL1 405 aa4.72□□□□□ -1.65
SMARCE1-219ENST00000583294 OSBPL8Q9BZF1 889 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms