RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.11□□□□□ -0.31
GGA3-214ENST00000582717 DLGAP4Q9Y2H0 992 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
GGA3-214ENST00000582717 DSCR3O14972 297 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 STK16O75716 305 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 CCNKO75909 580 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 KRT75O95678 551 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 CDK1P06493 297 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 CA3P07451 260 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
GGA3-214ENST00000582717 HENMT1Q5T8I9 393 aaKnown RBP13.11□□□□□ -0.31
GGA3-214ENST00000582717 ZNF544Q6NX49 715 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 TMC5Q6UXY8 1006 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
GGA3-214ENST00000582717 HEATR4Q86WZ0 1026 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 DNAJC22Q8N4W6 341 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
GGA3-214ENST00000582717 NXPE3Q969Y0 559 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 CCDC32Q9BV29 185 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 TRPV5Q9NQA5 729 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 ITM2BQ9Y287 266 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 NOX1Q9Y5S8 564 aa13.11□□□□□ -0.31
GGA3-214ENST00000582717 TCF20Q9UGU0 1960 aaKnown RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 CLCA1A8K7I4 914 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 NPIPB8E9PQR5 432 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 PLK4O00444 970 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 IDH3BO43837 385 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 RB1P06400 928 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 POU2F2P09086 479 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 GPX2P18283 190 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 GTF2E2P29084 291 aaKnown RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 GGT2P36268 569 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 METAP1P53582 386 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 COPZ1P61923 177 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CARTPTQ16568 116 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CDKL4Q5MAI5 379 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 GDPD3Q7L5L3 318 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 ANKRD46Q86W74 232 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 TRAM1L1Q8N609 369 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 IL17RDQ8NFM7 739 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 ASB11Q8WXH4 323 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SPATA9Q9BWV2 254 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SLC12A9Q9BXP2 914 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 DKK3Q9UBP4 350 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 ZNF221Q9UK13 617 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 DIRAS1O95057 198 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 EPN2O95208 641 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 C8GP07360 202 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 MPC1LP0DKB6 136 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 XPAP23025 273 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 SOX6P35712 828 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 MMP12P39900 470 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SLC6A11P48066 632 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 NEK2P51955 445 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 UGT2B15P54855 530 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 MTAPQ13126 283 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 VEZF1Q14119 521 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 GGTA1PQ4G0N0 100 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 TECPR1Q7Z6L1 1165 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 CRELD1Q96HD1 420 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 NUAK2Q9H093 628 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SIRT5Q9NXA8 310 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 NFKBIL1Q9UBC1 381 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 FAM8A1Q9UBU6 413 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
GGA3-214ENST00000582717 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
GGA3-214ENST00000582717 TMEM202A6NGA9 273 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 OTOL1A6NHN0 477 aaPredicted RBP13.09□□□□□ -0.31
GGA3-214ENST00000582717 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 PRRT4C9JH25 899 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 CLIC1O00299 241 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 ZW10O43264 779 aa13.09□□□□□ -0.31
GGA3-214ENST00000582717 KCNK5O95279 499 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms