RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ZNF71Q9NQZ8 489 aaPredicted RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 CUTCQ9NTM9 273 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 TXLNGQ9NUQ3 528 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 IRAK4Q9NWZ3 460 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 RUVBL1Q9Y265 456 aaKnown RBP9.4□□□□□ -0.9
GGA3-209ENST00000580646 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 SLC22A7Q9Y694 548 aa9.4□□□□□ -0.9
GGA3-209ENST00000580646 ANKDD1BA6NHY2 528 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 H0YIG0 161 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PYCARD-AS1I3L0S3 204 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 BIRC5O15392 142 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 P2RX6O15547 441 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 ALBP02768 609 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CAPN1P07384 714 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 BPGMP07738 259 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CTSBP07858 339 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 DHRS4L1P0CG22 281 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PIM1P11309 404 aaPredicted RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 AGXTP21549 392 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PIK3CBP42338 1070 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PKNOX1P55347 436 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 SKP1P63208 163 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PHEXP78562 749 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 RGS1Q08116 209 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 LCP2Q13094 533 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 RBBP5Q15291 538 aaKnown RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 HKDC1Q2TB90 917 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 ADPRMQ3LIE5 342 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 FRMD7Q6ZUT3 714 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
GGA3-209ENST00000580646 AFAP1L2Q8N4X5 818 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 ENDOVQ8N8Q3 282 aaKnown RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 OR7G3Q8NG95 312 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 OR52B6Q8NGF0 335 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CREB3L4Q8TEY5 395 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 PPP4R1Q8TF05 950 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 THAP4Q8WY91 577 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CNDP1Q96KN2 507 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 ATP6V1G3Q96LB4 118 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 C10orf90Q96M02 699 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 NSUN5Q96P11 429 aaKnown RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 DRC3Q9H069 523 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 GSTO2Q9H4Y5 243 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CLK4Q9HAZ1 481 aaKnown RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 SEMA4BQ9NPR2 832 aaPredicted RBP9.39□□□□□ -0.91
GGA3-209ENST00000580646 ZNF446Q9NWS9 450 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 SLC17A7Q9P2U7 560 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 TRPS1Q9UHF7 1281 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 CDC14AQ9UNH5 594 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 MAN2B2Q9Y2E5 1009 aa9.39□□□□□ -0.91
GGA3-209ENST00000580646 HMGB1P1B2RPK0 211 aaPredicted RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 MKRN2OSH3BPM6 223 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 FOXE1O00358 373 aaPredicted RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 NDUFS4O43181 175 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 NPHS1O60500 1241 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 SNUPNO95149 360 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 NSA2O95478 260 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 ESRRBO95718 433 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 EIF2S1P05198 315 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 ENO1P06733 434 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 SMIM10L1P0DMW3 83 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 TSFMP43897 325 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 NAGLUP54802 743 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 STXBP1P61764 594 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 DCDP81605 110 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 HYAL2Q12891 473 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 IL10RAQ13651 578 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 HERC3Q15034 1050 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 FAM198BQ6UWH4 519 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 ABHD13Q7L211 337 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 MILR1Q7Z6M3 343 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 C10orf107Q8IVU9 208 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 APLFQ8IW19 511 aaPredicted RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 SRFBP1Q8NEF9 429 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 OR4F6Q8NGB9 312 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 OR6Y1Q8NGX8 325 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 WDR20Q8TBZ3 569 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 ZNF473Q8WTR7 871 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 GAL3ST3Q96A11 431 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 FKBP10Q96AY3 582 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 SMIM10Q96HG1 83 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 SLC29A3Q9BZD2 475 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 SLC26A1Q9H2B4 701 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 C12orf65Q9H3J6 166 aaKnown RBP9.38□□□□□ -0.91
GGA3-209ENST00000580646 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 RNF11Q9Y3C5 154 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 BSNQ9UPA5 3926 aa9.38□□□□□ -0.91
GGA3-209ENST00000580646 IGLV3-12A0A075B6K2 115 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 LRIT2A6NDA9 550 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 C9J4A7 227 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 SASH3O75995 380 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 WISP1O95388 367 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms