RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NR6A1Q15406 480 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 TCHHL1Q5QJ38 904 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 ABHD17CQ6PCB6 329 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 SCIMPQ6UWF3 145 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 TTLL10Q6ZVT0 673 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 ACAD11Q709F0 780 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 CPLX4Q7Z7G2 160 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 UTP15Q8TED0 518 aaKnown RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 TUBGCP3Q96CW5 907 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 NXPE2Q96DL1 559 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 CTRCQ99895 268 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 NPLQ9BXD5 320 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 ACPTQ9BZG2 426 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 MEAF6Q9HAF1 191 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 THSD1Q9NS62 852 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 MARCOQ9UEW3 520 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 WBP11Q9Y2W2 641 aaKnown RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 B3GALT1Q9Y5Z6 326 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 AK5Q9Y6K8 562 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 SPACA6W5XKT8 324 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 SRRM3A6NNA2 597 aaPredicted RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 P2RX6O15547 441 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 NSA2O95478 260 aaKnown RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 ZNF888P0CJ79 500 aaPredicted RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 SMIM10L1P0DMW3 83 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 IL10P22301 178 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 HNRNPH1P31943 449 aaKnown RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 SSR2P43308 183 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 HTR6P50406 440 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 GYS2P54840 703 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 BTN3A2P78410 334 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 DCDP81605 110 aaKnown RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 BTKQ06187 659 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 HYAL2Q12891 473 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 SLC9A5Q14940 896 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 CYP20A1Q6UW02 462 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 NUDT13Q86X67 352 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 FAM9CQ8IZT9 166 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 METTL4Q8N3J2 472 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 C7orf57Q8NEG2 295 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 CEP70Q8NHQ1 597 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 ZCCHC10Q8TBK6 192 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 CHTF18Q8WVB6 975 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 SMIM10Q96HG1 83 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 ZNF317Q96PQ6 595 aaPredicted RBP13.57□□□□□ -0.24
SKA2-205ENST00000580541 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 KLHL31Q9H511 634 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 ZNF304Q9HCX3 659 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 FGFR1OP2Q9NVK5 253 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 SIRT5Q9NXA8 310 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 NEUROG3Q9Y4Z2 214 aa13.57□□□□□ -0.24
SKA2-205ENST00000580541 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 KIAA0754O94854 1291 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 STATHP02808 62 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 NTRK1P04629 796 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 HIST1H1TP22492 207 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 ETV5P41161 510 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 RAB8AP61006 207 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 IRX1P78414 480 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 HMGCS1Q01581 520 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 MAP7Q14244 749 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 DEFB134Q4QY38 66 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 XKR7Q5GH72 579 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 CCNYL2Q5T2Q4 361 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 ADNP2Q6IQ32 1131 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 C6orf15Q6UXA7 325 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 Q6ZSR9 355 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 ZCCHC7Q8N3Z6 543 aaKnown RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 ESX1Q8N693 406 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 ADAMTS18Q8TE60 1221 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 STON2Q8WXE9 905 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 ZNF578Q96N58 590 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 HBEGFQ99075 208 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 DDX31Q9H8H2 851 aaKnown RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 PRDM7Q9NQW5 492 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 MRGBPQ9NV56 204 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 GPN3Q9UHW5 284 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 PADI1Q9ULC6 663 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 MSRB2Q9Y3D2 182 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 NAALAD2Q9Y3Q0 740 aa13.56□□□□□ -0.24
SKA2-205ENST00000580541 TMEM184BQ9Y519 407 aaPredicted RBP13.56□□□□□ -0.24
SKA2-205ENST00000580541 GNG14A0A1W2PPG7 69 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms