RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SDHDO14521 159 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 DSCR3O14972 297 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 LSM1O15116 133 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 FOXS1O43638 330 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 B3GALT4O96024 378 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 HBQ1P09105 142 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 ZNF28P17035 718 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TSFMP43897 325 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 RAP1GDS1P52306 607 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 PLA2G16P53816 162 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 SEC24CP53992 1094 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TGM3Q08188 693 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 HERC3Q15034 1050 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 NR6A1Q15406 480 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 SPDYAQ5MJ70 313 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 VWA5B1Q5TIE3 1220 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TMEM164Q5U3C3 297 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 CGB2Q6NT52 195 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 RHBDD2Q6NTF9 364 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 EPGNQ6UW88 154 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TTLL10Q6ZVT0 673 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 PRSS41Q7RTY9 318 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC38A9Q8NBW4 561 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 CHTF18Q8WVB6 975 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 APIPQ96GX9 242 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 MAELQ96JY0 434 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 KCNC2Q96PR1 638 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 C17orf62Q9BQA9 187 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 ZNF717Q9BY31 904 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 B3GNT4Q9C0J1 378 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC7A5P2Q9GIP4 190 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 NRSN2Q9GZP1 204 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 NPHS2Q9NP85 383 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 LHX9Q9NQ69 397 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 PRDM7Q9NQW5 492 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 RIC8BQ9NVN3 520 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 AHSPQ9NZD4 102 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 DHCR7Q9UBM7 475 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 KLK13Q9UKR3 277 aa15.1■□□□□ 0.01
CSNK1D-212ENST00000580061 A0A0G2JN53 185 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 GALR3O60755 368 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 CPNE3O75131 537 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 KIAA0754O94854 1291 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 NSA2O95478 260 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 NTRK1P04629 796 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 PRR35P0CG20 571 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 IL1RNP18510 177 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 BSGP35613 385 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 AQP5P55064 265 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 KIAA0040Q15053 153 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 DEFB134Q4QY38 66 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC9B1Q4ZJI4 515 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SPIN4Q56A73 249 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 OR4C11Q6IEV9 310 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 IGF2-ASQ6U949 168 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 PDSS2Q86YH6 399 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 DTWD1Q8N5C7 304 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 RFWD2Q8NHY2 731 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 TUBGCP3Q96CW5 907 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 CLIP3Q96DZ5 547 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 RNF31Q96EP0 1072 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 MVB12AQ96EY5 273 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 C11orf24Q96F05 449 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 THOC1Q96FV9 657 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 METTL2AQ96IZ6 378 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 PPP3R2Q96LZ3 170 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SLC46A1Q96NT5 459 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 QRFPRQ96P65 431 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SIKE1Q9BRV8 207 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SORBS1Q9BX66 1292 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 WDR55Q9H6Y2 383 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 AKTIPQ9H8T0 292 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 LRTM1Q9HBL6 345 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 ANKHQ9HCJ1 492 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 TXLNGQ9NUQ3 528 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SIRT5Q9NXA8 310 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 NAALAD2Q9Y3Q0 740 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 SDK2Q58EX2 2172 aa15.09■□□□□ 0.01
CSNK1D-212ENST00000580061 A0A0A6YYC8 382 aaPredicted RBP15.08■□□□□ 0
CSNK1D-212ENST00000580061 A0A1B0GX78 115 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 H0YIG0 161 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 I3L1I5 382 aaPredicted RBP15.08■□□□□ 0
CSNK1D-212ENST00000580061 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
CSNK1D-212ENST00000580061 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0
CSNK1D-212ENST00000580061 PEX11AO75192 247 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 VPS4BO75351 444 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 KLHL18O94889 574 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 SCELO95171 688 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 TROVE2P10155 538 aaKnown RBP eCLIP15.08■□□□□ 0
CSNK1D-212ENST00000580061 HIST1H1TP22492 207 aaPredicted RBP15.08■□□□□ 0
CSNK1D-212ENST00000580061 ALAS2P22557 587 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 EPHA3P29320 983 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 RORAP35398 523 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 SSR2P43308 183 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 AVPR1BP47901 424 aa15.08■□□□□ 0
CSNK1D-212ENST00000580061 BTN3A2P78410 334 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms