RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ZNF888P0CJ79 500 aaPredicted RBP9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ABOP16442 354 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ZNF24P17028 368 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PGAM1P18669 254 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 MAOAP21397 527 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PTGER1P34995 402 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PGGT1BP53609 377 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 AP1S2P56377 157 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 IL2P60568 153 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 RNASEH2BQ5TBB1 312 aaKnown RBP9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 CCDC137Q6PK04 289 aaKnown RBP9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 C3P1Q6ZMU1 363 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 KIAA0408Q6ZU52 694 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 GALNT7Q86SF2 657 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 IGDCC3Q8IVU1 814 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 SULF2Q8IWU5 870 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PPIL6Q8IXY8 311 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ANKRD53Q8N9V6 530 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 POGLUT1Q8NBL1 392 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 APCDD1LQ8NCL9 501 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 C16orf52Q8NHV5 167 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 CREB3L4Q8TEY5 395 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 NEIL2Q969S2 332 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PBKQ96KB5 322 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 SLC6A16Q9GZN6 736 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 AICDAQ9GZX7 198 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 KLHL31Q9H511 634 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 NECTIN3Q9NQS3 549 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ARL15Q9NXU5 204 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 ZFATQ9P243 1243 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 IKZF3Q9UKT9 509 aa9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 PPIEQ9UNP9 301 aaKnown RBP9.96□□□□□ -0.82
CSNK1D-210ENST00000579308 C4orf51C9J302 202 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 PRRG2O14669 202 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 TTC4O95801 387 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 IGFBP2P18065 325 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 GPR143P51810 404 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 ITGA8P53708 1063 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 SKP1P63208 163 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 REEP5Q00765 189 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 RGS1Q08116 209 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 CSHL1Q14406 222 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 MSS51Q4VC12 460 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 CMPK2Q5EBM0 449 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 TEDDM1Q5T9Z0 273 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 SBSNQ6UWP8 590 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 SPNS3Q6ZMD2 512 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 ABHD13Q7L211 337 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 CEP97Q8IW35 865 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 CYP4X1Q8N118 509 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 MARVELD2Q8N4S9 558 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 FAM57AQ8TBR7 257 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 SLC5A11Q8WWX8 675 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 ATL1Q8WXF7 558 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 PDLIM5Q96HC4 596 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 MCCC2Q9HCC0 563 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 PRDM9Q9NQV7 894 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 ITGB1BP2Q9UKP3 347 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 PPT2Q9UMR5 302 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 VWA7Q9Y334 891 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 CLDN16Q9Y5I7 305 aa9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 ZNF469Q96JG9 3925 aaPredicted RBP9.95□□□□□ -0.82
CSNK1D-210ENST00000579308 A0A1B0GTH9 108 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TMEM200CA6NKL6 621 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 GOLGA6L6A8MZA4 724 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 PEX1O43933 1283 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 BANF1O75531 89 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 SERPIND1P05546 499 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 SERPINA6P08185 405 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 ENO2P09104 434 aaPredicted RBP9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TFEBP19484 476 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 PTGS2P35354 604 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 FNTAP49354 379 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 MEOX1P50221 254 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 RAB8AP61006 207 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TLE4Q04727 773 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TFF3Q07654 80 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TERF2Q15554 542 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 PPP1R3AQ16821 1122 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 SPANXN3Q5MJ09 141 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 HECTD2Q5U5R9 776 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 NXPE4Q6UWF7 544 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 MDGA2Q7Z553 956 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 THOC6Q86W42 341 aaKnown RBP9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 CA13Q8N1Q1 262 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TBC1D19Q8N5T2 526 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 ZFP62Q8NB50 900 aaPredicted RBP9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TRPV3Q8NET8 790 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 LILRB4Q8NHJ6 448 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 CA5BP1Q8WTZ4 195 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TMEM125Q96AQ2 219 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 SDCCAG3Q96C92 435 aa9.94□□□□□ -0.82
CSNK1D-210ENST00000579308 TRIM54Q9BYV2 358 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms