RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 FBXO48Q5FWF7 155 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 TOR1AIP1Q5JTV8 583 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 LRRC8EQ6NSJ5 796 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SBSNQ6UWP8 590 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 C16orf47Q6ZP98 133 aaPredicted RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 PCGF5Q86SE9 256 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 TMPRSS11BQ86T26 416 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 THOC6Q86W42 341 aaKnown RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 SPPL2CQ8IUH8 684 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SIAH3Q8IW03 269 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 CNTN4Q8IWV2 1026 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 CA13Q8N1Q1 262 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SPATA6LQ8N4H0 392 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SLC5A8Q8N695 610 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 NT5CQ8TCD5 201 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 ELP5Q8TE02 316 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 ANKRD49Q8WVL7 239 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 MAGED4Q96JG8 741 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 FRMD6Q96NE9 622 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 OR1F2PQ96R84 312 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 TRIM51Q9BSJ1 452 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 TRIM54Q9BYV2 358 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 TRIM31Q9BZY9 425 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 ZFP69BQ9UJL9 534 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 ITGB1BP2Q9UKP3 347 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SNX12Q9UMY4 172 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 SLC22A14Q9Y267 594 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 DYRK1BQ9Y463 629 aa8.37□□□□□ -1.07
GGA3-207ENST00000578896 KLF2Q9Y5W3 355 aaPredicted RBP8.37□□□□□ -1.07
GGA3-207ENST00000578896 GOLGA6L10A0A0M3HER8 536 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 ASPDHA6ND91 283 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 ASNA1O43681 348 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 PRMT3O60678 531 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 SLC25A12O75746 678 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 TTC4O95801 387 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 CYC1P08574 325 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 COX6B1P14854 86 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 PTGER1P34995 402 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 HNRNPFP52597 415 aaKnown RBP8.36□□□□□ -1.07
GGA3-207ENST00000578896 ITGA8P53708 1063 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 CASP6P55212 293 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 AP1S2P56377 157 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 MLF1P58340 268 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 TAS2R39P59534 338 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 KRTAP10-9P60411 292 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 BTN3A2P78410 334 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 RGS1Q08116 209 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 PWP1Q13610 501 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 RUNX2Q13950 521 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 FASTKD3Q14CZ7 662 aaKnown RBP8.36□□□□□ -1.07
GGA3-207ENST00000578896 PPP1R3AQ16821 1122 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 FAM45BPQ6NSW5 357 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 NXPE4Q6UWF7 544 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 KIAA0408Q6ZU52 694 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 DOLPP1Q86YN1 238 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 CHERPQ8IWX8 916 aaKnown RBP8.36□□□□□ -1.07
GGA3-207ENST00000578896 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 TMEM178AQ8NBL3 297 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 NFAM1Q8NET5 270 aaPredicted RBP8.36□□□□□ -1.07
GGA3-207ENST00000578896 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 CREB3L4Q8TEY5 395 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 AGAP11Q8TF27 550 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 ESAMQ96AP7 390 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 SARGQ9BW04 601 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 PNO1Q9NRX1 252 aaKnown RBP8.36□□□□□ -1.07
GGA3-207ENST00000578896 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 ZNF835Q9Y2P0 537 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 MEMO1Q9Y316 297 aa8.36□□□□□ -1.07
GGA3-207ENST00000578896 TRBV11-1A0A0K0K1C0 115 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 FAM95CA0A1B0GW59 222 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 NCF1BA6NI72 391 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 SAGE2PA6NJ88 616 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 NCF1CA8MVU1 366 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 TGFBR3LH3BV60 316 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 PSMD12O00232 456 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 PRKNO60260 465 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 NME2P1O60361 137 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 CDC40O60508 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
GGA3-207ENST00000578896 PDE9AO76083 593 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 MYO1DO94832 1006 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 SMIM10L1P0DMW3 83 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 NCF1P14598 390 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 ABOP16442 354 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 ZNF37AP17032 561 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 IL10P22301 178 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 NME2P22392 152 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 JAK1P23458 1154 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 AHRP35869 848 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 GMPRP36959 345 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 CYB561P49447 251 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 MEOX1P50221 254 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms