RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SLC12A4Q9UP95 1085 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PCDHGA7Q9Y5G6 932 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SPACA6W5XKT8 324 aa10.73□□□□□ -0.69
CDK5RAP3-210ENST00000578733 A0A1B0GTL3 188 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 A0A1B0GX78 115 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 H0YIG0 161 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 STMND1H3BQB6 276 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HDAC3O15379 428 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 P2RX6O15547 441 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ERI3O43414 337 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HCRTR1O43613 425 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 B3GALT2O43825 422 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SKAP2O75563 359 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RSL1D1O76021 490 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KIAA0754O94854 1291 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NSA2O95478 260 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CD63P08962 238 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TROVE2P10155 538 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KITP10721 976 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ALOX12P18054 663 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ETV5P41161 510 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SSR2P43308 183 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NEK2P51955 445 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ACSM2AQ08AH3 577 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ABHD18Q0P651 414 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MAD2L1Q13257 205 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MAP7Q14244 749 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RTP5Q14D33 572 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ABRAXAS2Q15018 415 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ATP6AP1LQ52LC2 224 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TCHHL1Q5QJ38 904 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CES4AQ5XG92 561 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ACSM2BQ68CK6 577 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RHBDD2Q6NTF9 364 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TRIM46Q7Z4K8 759 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NUDT13Q86X67 352 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MS4A6EQ96DS6 147 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C19orf60Q96EN9 201 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PPP3R2Q96LZ3 170 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF578Q96N58 590 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SLC46A1Q96NT5 459 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NSRP1Q9H0G5 558 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PNPOQ9NVS9 261 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DNAJC15Q9Y5T4 150 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 B3GALT1Q9Y5Z6 326 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ITPR1Q14643 2758 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FREM2Q5SZK8 3169 aa10.72□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C9orf172C9J069 976 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C9J4A7 227 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 H3BMH7 237 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LOC400499M0QZD8 3231 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PIP5K1BO14986 540 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 POLR3GO15318 223 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GUCY1B2O75343 617 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 STK17BO94768 372 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TGDSO95455 350 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 STATHP02808 62 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NTRK1P04629 796 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF888P0CJ79 500 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FBLP22087 321 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MAPK1P28482 360 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ARRB2P32121 409 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HTR6P50406 440 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MTTPP55157 894 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 RAB8AP61006 207 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DCDP81605 110 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NR6A1Q15406 480 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PDCD2Q16342 344 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ARHGAP40Q5TG30 622 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 OR4C11Q6IEV9 310 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ADNP2Q6IQ32 1131 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ABHD17CQ6PCB6 329 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CYP20A1Q6UW02 462 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C6orf15Q6UXA7 325 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ATG14Q6ZNE5 492 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 VN1R5Q7Z5H4 357 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PROSER1Q86XN7 944 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LRRC34Q8IZ02 419 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ESX1Q8N693 406 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KCT2Q8NC54 265 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ADAMTS18Q8TE60 1221 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 MMABQ96EY8 250 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C10orf90Q96M02 699 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 F2RL3Q96RI0 385 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SERINC2Q96SA4 455 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 NPLQ9BXD5 320 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TRIM55Q9BYV6 548 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 C20orf27Q9GZN8 174 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 OR51B5Q9H339 312 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF395Q9H8N7 513 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ZNF304Q9HCX3 659 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FARSBQ9NSD9 589 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms