RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 K7EM74 188 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 CDH16O75309 829 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 HEXBP07686 556 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 HPDP32754 393 aaPredicted RBP18.25■□□□□ 0.51
SS18-208ENST00000577751 L3MBTL4Q8NA19 623 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 CLEC1AQ8NC01 280 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 FDCSPQ8NFU4 85 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 VPS50Q96JG6 964 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 OR1F2PQ96R84 312 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 SLC25A23Q9BV35 468 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 NTMT1Q9BV86 223 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 REXO4Q9GZR2 422 aaKnown RBP18.25■□□□□ 0.51
SS18-208ENST00000577751 ZBTB26Q9HCK0 441 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 ATP13A2Q9NQ11 1180 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 PCTPQ9UKL6 214 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 TP53TG5Q9Y2B4 290 aa18.25■□□□□ 0.51
SS18-208ENST00000577751 BOD1L1Q8NFC6 3051 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 FOXO6A8MYZ6 492 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 MASP2O00187 686 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 OR7A17O14581 309 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 CHST10O43529 356 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 KALRNO60229 2985 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 PDGFAP04085 211 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 RPS17P08708 135 aaKnown RBP18.24■□□□□ 0.51
SS18-208ENST00000577751 ACPPP15309 386 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 SERPINB1P30740 379 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 OLR1P78380 273 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 C19orf57Q0VDD7 668 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 NFATC3Q12968 1075 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 TUBB8Q3ZCM7 444 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 LACTB2Q53H82 288 aaPredicted RBP18.24■□□□□ 0.51
SS18-208ENST00000577751 OR2L5Q8NG80 312 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 OR2W6PQ8NHA6 318 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 CCT6BQ92526 530 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 PEX11GQ96HA9 241 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 QRFPRQ96P65 431 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 MS4A8Q9BY19 250 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 VN1R1Q9GZP7 353 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 NOL11Q9H8H0 719 aaKnown RBP18.24■□□□□ 0.51
SS18-208ENST00000577751 ACTR8Q9H981 624 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 ZNF71Q9NQZ8 489 aaPredicted RBP18.24■□□□□ 0.51
SS18-208ENST00000577751 LANCL2Q9NS86 450 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 ADGRE2Q9UHX3 823 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 PCDHGA11Q9Y5H2 935 aa18.24■□□□□ 0.51
SS18-208ENST00000577751 TNRC6AQ8NDV7 1962 aaKnown RBP18.24■□□□□ 0.51
SS18-208ENST00000577751 SMIM23A6NLE4 172 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 B8ZZF3 427 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 H0YIV9 168 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 ERI3O43414 337 aaKnown RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 ALOX12BO75342 701 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 HPP00738 406 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 KRT15P19012 456 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 BTN3A2P78410 334 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 AIMP2Q13155 320 aaKnown RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 ABHD17CQ6PCB6 329 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 GALNT16Q8N428 558 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 RIBC1Q8N443 379 aaPredicted RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 MREGQ8N565 214 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 PLPP5Q8NEB5 264 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 OR52B6Q8NGF0 335 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 TBC1D20Q96BZ9 403 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 C8orf44Q96CB5 159 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 NSUN5Q96P11 429 aaKnown RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 SMAD5Q99717 465 aaKnown RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 NUDT9Q9BW91 350 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 NPLQ9BXD5 320 aaPredicted RBP18.23■□□□□ 0.51
SS18-208ENST00000577751 PRDM7Q9NQW5 492 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 EMCNQ9ULC0 261 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 PCDHGB7Q9Y5F8 929 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 DOCK10Q96BY6 2186 aa18.23■□□□□ 0.51
SS18-208ENST00000577751 SCN2AQ99250 2005 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 IGHV1-45A0A0A0MS14 117 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 A6NL46 340 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 DLX3O60479 287 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 GLRA3O75311 464 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 CLDN9O95484 217 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 TUBBP07437 444 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 FHP07954 510 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 COX6A1P12074 109 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 TAC1P20366 129 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 NR1D1P20393 614 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 PIK3CBP42338 1070 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 RHAGQ02094 409 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 MYBPC3Q14896 1274 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 MINDY4Q4G0A6 757 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 FAAH2Q6GMR7 532 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 TRIM40Q6P9F5 258 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 NDUFAF7Q7L592 441 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 UBE3DQ7Z6J8 389 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 CA13Q8N1Q1 262 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 HUS1BQ8NHY5 278 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 ZNF483Q8TF39 744 aaPredicted RBP18.22■□□□□ 0.51
SS18-208ENST00000577751 FAR2Q96K12 515 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 F2RL3Q96RI0 385 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 ROPN1BQ9BZX4 212 aaPredicted RBP18.22■□□□□ 0.51
SS18-208ENST00000577751 ROPN1Q9HAT0 212 aaPredicted RBP18.22■□□□□ 0.51
SS18-208ENST00000577751 GPR83Q9NYM4 423 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 RNF11Q9Y3C5 154 aa18.22■□□□□ 0.51
SS18-208ENST00000577751 TLN1Q9Y490 2541 aaKnown RBP18.22■□□□□ 0.51
SS18-208ENST00000577751 A0A0G2JN53 185 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms