RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 KCNA7Q96RP8 456 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SHCBP1LQ9BZQ2 653 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 EPN3Q9H201 632 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ELOVL6Q9H5J4 265 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KCNK13Q9HB14 408 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 NMRK1Q9NWW6 199 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PLEKHB1Q9UF11 243 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CLCA2Q9UQC9 943 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CENPEQ02224 2701 aa10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MDC1Q14676 2089 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LOC105369274A0A096LPK9 316 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LOC102723532A0A0G2JNH3 316 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MAGEB17A8MXT2 336 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TMEM233B4DJY2 109 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 H0YGG7 62 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RSL1D1O76021 490 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SEMA3DO95025 777 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 VIMP08670 466 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SFTPCP11686 197 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FGF5P12034 268 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FOLR1P15328 257 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 DRD4P21917 467 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SERPINB3P29508 390 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 NEK2P51955 445 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ARF3P61204 181 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PHEXP78562 749 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FOXK1P85037 733 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MC2RQ01718 297 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 BTKQ06187 659 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FAM53BQ14153 422 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RBBP5Q15291 538 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 YOD1Q5VVQ6 348 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FRMPD2BQ6IN97 320 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CGB2Q6NT52 195 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 GALNT18Q6P9A2 607 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LARP4Q71RC2 724 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MAVSQ7Z434 540 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 B3GNT8Q7Z7M8 397 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ASPGQ86U10 573 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TICAM1Q8IUC6 712 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PARP9Q8IXQ6 854 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 OR4N4Q8N0Y3 316 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ZNF655Q8N720 491 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 AGBL5Q8NDL9 886 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SRFBP1Q8NEF9 429 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CHTF18Q8WVB6 975 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SLC13A3Q8WWT9 602 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SELENOMQ8WWX9 145 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FCRL1Q96LA6 429 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 DEPDC7Q96QD5 511 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SERPINI1Q99574 410 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MS4A8Q9BY19 250 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TRIM55Q9BYV6 548 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CLK4Q9HAZ1 481 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 DMRT3Q9NQL9 472 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FARSBQ9NSD9 589 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FGFR1OP2Q9NVK5 253 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KLHL14Q9P2G3 628 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 VPS29Q9UBQ0 182 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SERTAD3Q9UJW9 196 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SLC22A7Q9Y694 548 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
CDK5RAP3-204ENST00000577664 A0A0J9YVX5 310 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 URADA6NGE7 173 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FFAR3O14843 346 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PIP5K1BO14986 540 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 LSM1O15116 133 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 GPR42O15529 346 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RGS14O43566 566 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CRCPO75575 148 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SCELO95171 688 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ONECUT2O95948 504 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CSTF2P33240 577 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 HTR6P50406 440 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 SEC24CP53992 1094 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 IRX1P78414 480 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TBL3Q12788 808 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 C16orf72Q14CZ0 275 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KHDRBS2Q5VWX1 349 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 METTL21CQ5VZV1 264 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 OGFOD2Q6N063 350 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TMEM214Q6NUQ4 689 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 NIPAL1Q6NVV3 410 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TLDC1Q6P9B6 456 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 IGF2-ASQ6U949 168 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FAM47EQ6ZV65 393 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MED25Q71SY5 747 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ADCK2Q7Z695 626 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PLD3Q8IV08 490 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 METTL4Q8N3J2 472 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ACTRT2Q8TDY3 377 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 RERGQ96A58 199 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MS4A6EQ96DS6 147 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 C19orf60Q96EN9 201 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 PRR11Q96HE9 360 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms